| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3030 |
|---|
| Symbol | |
|---|
| ID | 5671410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 3563155 |
|---|
| End bp | 3564657 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641241929 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001507349 |
|---|
| Protein GI | 158314841 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCCGC CGGCGGGCCC GTTCGCCGAG GCCAGGGCGC GGTACCTCGC GCTGGAGGCG
CTGCTCGCCG GGGCGGACGC CCGCGCTGGC CGGCACGACG AGGTCGAGGA CCTGATCGAG
CGGGATGGCC GTGAGGTGCT GCGGGCGCTG CTGCAGGGCC ATCTTGACCT GCGTGCCCGT
GAGGAGACGC GGGCCGACCC GCCACCGGTC GGTGCTGACG GGGTGGCCCG TACCCGGCTG
GAACGCGGCC ATGGCCGGCG GCTGGTGTCC CAGTTCGGGC AGGTCGTGGT CAGCCGGCAC
GCCTACCGGG CGGCGGGGGC GGGCAACCTG CATCCCGCGG ACGCGGTGCT GAACCTTCCG
GCGGGGCTGT ACTCGCACAC GCTCGCGCGC AGGCTCGCCC TGGAGGTGAC CCGGGGCTCG
TTCGACGACG CGGTCGACGC GGTCGCCCGC GCGACCGGCC AGGTGATGGG CAAACGGCTC
GCCGTCGAGC TCGTCCGGAG CCTGGCCGCC GACATCACCG CCTTCTACGC CCAGCCACGG
CCCGAGATCA CCCCCGCCGG CCGGCTGCTG GTCCTCCAGT TCGACGGCAA GGGCATCGTC
ATGCGCCCCG AGGCGCTGCG CCCGGCGACC GCGAAGGCCG CCGAGGCGAG GAAGAACCGG
CTGGCCACCC GGCTGTCACC CGGCGAGAAA GCCAACCGCA AACGGATGGC CGAGATCGCC
ATCGTGCACG ACACCACCCC CGCGCCGCGC ACCGTCGACG ACGTCATCCC CCGCCGCGGC
AACGCCCAGG CCAGCGGCCA GCCCCGGGCG GACGGGCCGA CGGCCACCGG GACCTGGCTG
GCCGCCTCCG TCGTCGACGA CATCGCCACC GTCATCGCCG CCGGCTTCGA CGAGGCCGAA
CGCCGCGACC CCCACCAGCA GCGGACCTGG GTCGTGCTCG TCGACGGCAA CAACACCCAG
CTCGACGCGA TCCACGCCGA GGCCACCCGC CGCGACGTCA CCATCACCGT CATCGTCGAC
TTCATCCACG TCCTCGAGTA CCTCTGGACC GCCGCCTGGT CGTTCTTCGA CAAGGGCGAC
CCCGACGCCG AGGACTGGGT CCACGCACAG GCCCGCGGCG TGCTCGCCGG CAAGGCCCAC
GCGATCGCCT CCGGGTTCCG CCGCCGCGCG ACCCGCAACC ACTACAACGC CACCGAACGC
AAGGGCGCCG ACACCGCCGC CGACTACCTC GACGCCAAGG CCCCCTACCT GGGCTACGAC
CTCGCGCTCG CCAACGGCTG GCCGATCGCG ACCGGCGTCG TCGAGGGCTC CTGCCGCCAC
CTCATCAAGG ACCGATTCGA CATCACCGGA GCCAGATGGG GCCTCGACGG CGCCGAAGCA
GTCCTCCTCC TCCGCGCAGT CGTCACCAAC GGCGACTTCG ACGCCTACTG GGCTTACCAC
CTCGACCAGG AACAGCACCG CAACCACCAC ACCAAGTTCG CCGAACACTA CACACCGACT
TGA
|
|---|
| Protein sequence | MPPPAGPFAE ARARYLALEA LLAGADARAG RHDEVEDLIE RDGREVLRAL LQGHLDLRAR
EETRADPPPV GADGVARTRL ERGHGRRLVS QFGQVVVSRH AYRAAGAGNL HPADAVLNLP
AGLYSHTLAR RLALEVTRGS FDDAVDAVAR ATGQVMGKRL AVELVRSLAA DITAFYAQPR
PEITPAGRLL VLQFDGKGIV MRPEALRPAT AKAAEARKNR LATRLSPGEK ANRKRMAEIA
IVHDTTPAPR TVDDVIPRRG NAQASGQPRA DGPTATGTWL AASVVDDIAT VIAAGFDEAE
RRDPHQQRTW VVLVDGNNTQ LDAIHAEATR RDVTITVIVD FIHVLEYLWT AAWSFFDKGD
PDAEDWVHAQ ARGVLAGKAH AIASGFRRRA TRNHYNATER KGADTAADYL DAKAPYLGYD
LALANGWPIA TGVVEGSCRH LIKDRFDITG ARWGLDGAEA VLLLRAVVTN GDFDAYWAYH
LDQEQHRNHH TKFAEHYTPT
|
|---|
| |