| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2993 |
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| Symbol | |
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| ID | 5675706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3519023 |
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| End bp | 3520846 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641241896 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001507316 |
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| Protein GI | 158314808 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.999579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCACA CCAACGTGCA GCCGTCTAAC TTGCACAGTA CTGAGCAAGT AGGCGCTCGA
AGTGCCATGA CACGGGAGGG CATGACAGTG CACCTGATCG AACGTAGGCC GATCGAACCG
ACCGATACCC CGTACCCGCG GCGCTGGGCC GGACTCGCGG TCCTGTGCCT GGCCCTTCTG
ATCATCGTGA TGGCCAACAC CTCGCTGATC GTGGCCATCC CCGACATGGT CCGGGACCTC
TCACTGACCA GCGCGGATCA GCAGTGGACG ATTGACGCCT ACACCGTTCC GTACGCGGCA
CTGATGCTGG TGCTCGGCGC GCTCGGCGAC CGGTACAGCC GGCGCGGCGG TCTCATCGTC
GGCCTTCTTC TGTTCGGTGC CGGTTCGATC GTGGGAGCGC TGGCCGACAG CACGGCAGCG
GTGGTCATCG CGCGGGCCAT CATGGGTGTC GGCGCGGCCA CTATCATGCC TGCGACGCTG
TCACTACTGG TCGCAACATT TCCGAAACGG GAACGTACGC TCGCCATCAC CATATGGACC
ACCACCTCAG GCCTTGCCAT CGCCCTCGGT CCGCTCCTTG CGGGACAGCT CTTGGAAAGC
TATCCCTGGA ACTCCACGTT TCTGATCAAT CTCCCGATCG CGGCGATCAC GATCGGTGCA
ACGATGGTCT GCATCCCGCC CTCGAAGGCC AACGGCCCAG GACGCTCCGA TATCGTCGGT
GGGCTGCTGT CGATCGCCAC GATCGCTGCA CTCATCTACG CGATCATCGA GGGACCGCAC
TTCGGGTGGG ACACCTACCC GATCATCGCG GCGGTCGTCG CGGCCGTTGG CCTGGTCGCA
TTCGTCCTGT GGGAGCTGCG GACCCGGACT CCGATCCTGG ATGTCCGCCT GTTCCGGATC
CGGGCCTTCT CCGGATCTAC GCTCGCAGTG TTGCTGTTCT TCCTCGGCAC CTTCGGCGCG
ATCTACTACA TCTCGCAGTA CCTGCAGTTC GTACTCGGCC TCGGCCCGTT GGACACCGGT
ATCCGGCTGC TTCCGCTAGC CGGCGCGGTC TTCGTCGGCG CGGCACTGAC TGGACGGATG
ACCCCACGAC TCGGCGCGAA GGTGACTGTC CCCGCCGGAA TGGCGATCGG CGCGGCCGGC
ATCCTGCTGA TGACCGGCCT CGACGACGGC TCCGGATACA CCGACTTCCT CGCGCCGCTG
ACCATGCTCG GCCTAGCGAT CGGTCTGAGC GTCGCGCCGT GCACCGATGC CATCATGGGC
GTCTTCCCCG AGGACGAGCT GGGCGTCGGC GGCGCCGCGA ACGACACCGC AGTGGAGCTC
GGCGGGTCAC TGGGCATCGC CATCCTCGGG TCGATCCTCG CCACCTCCTA CAAGACCGAC
CTCACCGGCA CGGTCGGCAG CCAGCTACCG CATGACCTGC ACGAACCTGT CCTGGACTCG
GTCGGCGGCG CGATCAAGGT TGTCCAGGGC CTGGCCGAGC AGGGCGTGCC GCAGGCCGGA
CCACTCGCCG ACGCCGCCCG CCACTCCTTC ATCGAAGCCA TCACCCAGAC CAGCCTGGTC
GGCGCCATCA TCCTCACCGT GGGAACGGTG CTGGTGGGCC TCATTCTCCC CCGCCACAGC
ACACCGACGG CGCCGGCCGA ACCAACGGAA GCAAACGCAG TCGGCAAACC CGAACCGGCT
GGTAGCCCTG CCGGCCCCGG TCGGCGTCAC GTTGGAACTC CGCCAGCACC CGATGGCTCC
GATCGACCCA GCCGAAGCTC GCGGCACGGA CGGGAAATCT TCGCGCACTC ATCCGCCAGC
CCGAGGCATC CGAGAACCCG GTAA
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| Protein sequence | MLHTNVQPSN LHSTEQVGAR SAMTREGMTV HLIERRPIEP TDTPYPRRWA GLAVLCLALL
IIVMANTSLI VAIPDMVRDL SLTSADQQWT IDAYTVPYAA LMLVLGALGD RYSRRGGLIV
GLLLFGAGSI VGALADSTAA VVIARAIMGV GAATIMPATL SLLVATFPKR ERTLAITIWT
TTSGLAIALG PLLAGQLLES YPWNSTFLIN LPIAAITIGA TMVCIPPSKA NGPGRSDIVG
GLLSIATIAA LIYAIIEGPH FGWDTYPIIA AVVAAVGLVA FVLWELRTRT PILDVRLFRI
RAFSGSTLAV LLFFLGTFGA IYYISQYLQF VLGLGPLDTG IRLLPLAGAV FVGAALTGRM
TPRLGAKVTV PAGMAIGAAG ILLMTGLDDG SGYTDFLAPL TMLGLAIGLS VAPCTDAIMG
VFPEDELGVG GAANDTAVEL GGSLGIAILG SILATSYKTD LTGTVGSQLP HDLHEPVLDS
VGGAIKVVQG LAEQGVPQAG PLADAARHSF IEAITQTSLV GAIILTVGTV LVGLILPRHS
TPTAPAEPTE ANAVGKPEPA GSPAGPGRRH VGTPPAPDGS DRPSRSSRHG REIFAHSSAS
PRHPRTR
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