Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2898 |
Symbol | |
ID | 5671285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3413643 |
End bp | 3414467 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641241805 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001507225 |
Protein GI | 158314717 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.40522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACCG TGTCAGCGGC TAGGCGGCCG ACGGCCCAGG AGGACAGGTC TTACCGACCG GCCGTCTACC AAGATCTGGC TCATCGGACG GTGGTGGTGA CCGGAGCGGC CCGGGGCATC GGAGCGGCGT ACGCGCAAGC GCTGCTTGCC AACGGGGCGA GCGTCGTCGC CGGTGACCTG GACGAGGCCG CCATGGCCGA GACCGCGGCC CGGCTTTCCC CCAGCGCCGA CCAGGGGGCA GCCATCGTCG CGATGGGGGT CGACGTCCGC GATCCGCAGG CGCACCGGCA GCTCGCGACC GCTGCGATCG ACAGGTTCGG CCGGCTCGAC GGGTGGATCA ACAACGCTGG CGTCTACCGG ACCGGTAGCG TTCTCGACTC GTCTACCGCC GAGGTCGGTC TGATGAACGA GGTTCATGTG CTCGGCGCGA CACTAGGCGT CCAGGCAGCC GCCGTGGCCA TGGGCGACGC CGGGGGCTCG ATCGTGAACA TGGCATCGAT CGCCGCGTTC GTGGTGCGTC CCAACGGCAG CGCCTACGGC GCCTCGAAGG CGGCGGTCAA GCACCTGACG GAGTTCCAGG CCGTCGAGCT CGGCCCGCTG GGCATCCGCG TCAACGCGGT CGCCCCTGGC ATGGTCAAAA CCGACATGAT CTCGTGGGTC ACCCAGAACC CCGCGCTGCT GGAGGCAAGC CGCGGTTCGA TACCGCTACG TCGCCTCGGC ACCCCGGGCG AGATCGCCGA CTGTGCGCTC TTCCTCCTCT CCGACGCGTC GCGGTTCATG ACAGGCCACA CCCTTGTCGT CGACGGGGGC GGCTGGCTGC GCTGA
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Protein sequence | MSTVSAARRP TAQEDRSYRP AVYQDLAHRT VVVTGAARGI GAAYAQALLA NGASVVAGDL DEAAMAETAA RLSPSADQGA AIVAMGVDVR DPQAHRQLAT AAIDRFGRLD GWINNAGVYR TGSVLDSSTA EVGLMNEVHV LGATLGVQAA AVAMGDAGGS IVNMASIAAF VVRPNGSAYG ASKAAVKHLT EFQAVELGPL GIRVNAVAPG MVKTDMISWV TQNPALLEAS RGSIPLRRLG TPGEIADCAL FLLSDASRFM TGHTLVVDGG GWLR
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