Gene Franean1_2864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2864 
Symbol 
ID5671253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3379686 
End bp3380591 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content67% 
IMG OID641241773 
Productalcohol dehydrogenase 
Protein accessionYP_001507193 
Protein GI158314685 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.293163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.188893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCTA TCCGGATTGA TCGTTTCGGT GGACCTGAGG TTCTGCGGAT CGTCGACACC 
GTCGATGTCG AGCCGAGATC GGACGAGGCG CTGGTCCGTA CCATCGCGAC CAGCATCAAC
CCGGTCGATG ATAAGACACG CGGAGGCGTG ATCGGCGAAG GGACACCGGC GCTGCCGATG
ACGCTCGGCT GGGACCTGGC TGGCATCGTG GTGGACGGTG GCGCGAGCGG TCTGCATGCG
GGGGCGAGGG TCATCGCGAT GTCACACCAG CTCGACACCG GCCGGGGGAC CTGGGCTGAT
CTGGTGGCGC TGCCGGTGTG CTCACTTGCG CCCGCGCCGA GGGCCGTCAG CCTTGTCGAG
GCGGCCACGC TGCCATTGCC CGGGCTGATC GCGTTGCAGA CGCTGAACTG GCTCGAGATA
TCTGCTGGGA AACTTCTGCT GGTCACCGGG GCGACCGGAG CGGTTGGCGG CCTGGCTGTG
CAAATCGCTC GTGCGCGGGG CGCACGGGTG GACGCTTTGG TTTCGCGCAC CGAGCACACA
GTCCTCGCCG AACGATACGG CGCCGAATTC GTCGCCACGA ATCCGAAAGC TTTCGGCGGC
CGCGGCTACG ACGCAGTCTT CGACACGTAC GGGGCCCTCG CGACGAAGGC GATCGCCGAC
GGCGGGCGGT ACGCCTCGAT CGCCACCCAG GCCGGACCTG CGCCAGACCT GACGTACCGG
GGCGTTCAAA CCATCGTGAA TCAGGTCCGC GAAGACGGGG CCGGGCTGGC CGAGCTGACC
AGGCTCGTCG ACGCCGGTGC GCTGAAGCTA CGAGTGGACT CCACCTTCGG CCTGCACGCC
ATCCAGGACG CCCATGCTCG CTATAAGCAG GGCCACCTGA ACGGGAAGAT CGCCATAATC
CTCTGA
 
Protein sequence
MRAIRIDRFG GPEVLRIVDT VDVEPRSDEA LVRTIATSIN PVDDKTRGGV IGEGTPALPM 
TLGWDLAGIV VDGGASGLHA GARVIAMSHQ LDTGRGTWAD LVALPVCSLA PAPRAVSLVE
AATLPLPGLI ALQTLNWLEI SAGKLLLVTG ATGAVGGLAV QIARARGARV DALVSRTEHT
VLAERYGAEF VATNPKAFGG RGYDAVFDTY GALATKAIAD GGRYASIATQ AGPAPDLTYR
GVQTIVNQVR EDGAGLAELT RLVDAGALKL RVDSTFGLHA IQDAHARYKQ GHLNGKIAII
L