Gene Franean1_2827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2827 
Symbol 
ID5671216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3345092 
End bp3346030 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content70% 
IMG OID641241736 
Productaminoglycoside phosphotransferase 
Protein accessionYP_001507156 
Protein GI158314648 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCTT CCTCGACGCC TGCGCTGCTG GCCGACGACC TGCGTAGATG TCTTGTGGTC 
GACGGTCCGG AGCGCGTCGA GGGTCTGCAC CGCCTCAGTC TTCGCCCGTT GGCGGGTGGC
CGGAACAACC ACGTCTTCGC CTGGCGAGAC CCGCAGGGCG AGGAGGTGTG TGTGAAGGCG
TACCGGGTTG ATGATCGACA GCGGGCGGAG CGGGAATGGC GCGCGCTCTC CTTGCTGGCG
AGGCATGGTG TGCCGAACGT GCCGCGACCG TTGTGGCGGG ATCAGCAGGA GGCCCGGCCT
GTCGTCGCGA TGACCATGCT GCCAGGTGCG AGCGTCCCTG ACCTGGCTGA GCCGGCGGCG
CGGGAGGCGG CCCTGGTGGG GCTGGCCGTG ACGCTGCGAC CGATCCACGA CGTCCCGTGG
GAGAACGGCT TCGCGAGGCT GCCCCGCGTC GACTCCGCGG CGCACTACGT GGCGAGGCTG
ACCGAGGTGT GGCCTGGTCA GCTCGGCACG CGGCCGGATG ACCCGCTGAC GCGGGACCTG
CGACTGCTGC TGGGGCTGTG GCGGGACAAC GGGGACGCGG AGATGCTCGC CCGCCCCGTG
GCACGGATCT TCTCGCGGGG TGACGGGAAC CTGGTGAACT GGCTGTGGGA TGGCGAGGTC
GCGCGCTGTG TCGACTTCGA GTTCTGCGGG TGGAGCGATC TGGCGTTCGA CGCCGCCGAT
CTCGTCGAGC ACATCAGCGC CCGTGAGGTC GACGATCGGG TCTGGTCGGC CGTGGTCACG
GCGCTCGGGG TCGCAGGTGA GCTGATGCCG AGGTTCCGCG CGGCGCAGCG GACGTGTGCG
TTGCGGTGGC TGGCGGTGCT GTGGAAGCAG CGGGAACGGC GGGTCGGGGA GTTCTCCGCC
CAGCTGGACC GTGTTCGGGT CCTGTTTCGC GACCAGTGA
 
Protein sequence
MAPSSTPALL ADDLRRCLVV DGPERVEGLH RLSLRPLAGG RNNHVFAWRD PQGEEVCVKA 
YRVDDRQRAE REWRALSLLA RHGVPNVPRP LWRDQQEARP VVAMTMLPGA SVPDLAEPAA
REAALVGLAV TLRPIHDVPW ENGFARLPRV DSAAHYVARL TEVWPGQLGT RPDDPLTRDL
RLLLGLWRDN GDAEMLARPV ARIFSRGDGN LVNWLWDGEV ARCVDFEFCG WSDLAFDAAD
LVEHISAREV DDRVWSAVVT ALGVAGELMP RFRAAQRTCA LRWLAVLWKQ RERRVGEFSA
QLDRVRVLFR DQ