Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2759 |
Symbol | |
ID | 5671148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3265314 |
End bp | 3267140 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641241668 |
Product | ATP-dependent OLD family endonuclease |
Protein accession | YP_001507088 |
Protein GI | 158314580 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTCT GTCGTGTGAC CCTGCGCCAC TTCCGTGGCG TTGAGGCCGG GACGGTGTAT CTCGACGGGG ACACGTTGCT GGTCGGGTCC AACAGCGTGG GCAAGTCCAC CGTGTGCGAG GCGCTGGATC TGGTTCTCGG CCCGGAGCGG ATGTTCCGCC GGCCTGTGAT CGACGAGTAC GACTTCTTCG CCAGCCAGTA TCAGGACGTG GACGGATCTC TCCCCGAGAT ACGCATCGAG GTGGTCCTGA CTGACCTGAC GCCGGAAGCG CGGCGGCGTT TCCACGGCCG CATGCGTCGC TGGTCACCAC GCCGACGTGA CTTCGCGGAG TCGGCGCCCG CTGGCGACGA GGGGGACAGC GAGGACGTGT GGTGCCTGCC CGTCGTGTTC CTGGGCCGGT TCAACCCGGA CGAGGACGAC TTCGAGGGCA GCACGTTCTT CGCGCATCCG GAACCCGTGG TTGACGACCT CACCGATGAA TCCACCGAGC TGGGCGGTGG GTTGAAGCCG TTCACCCGTG AGGACAAGCG GCACTGTGGC TTCCTGTACC TGCGTCCCAA CCGTACGGGC AGCCGCGCGC TCAGCTTCCA GCGCGGTTCG CTACTCGACA CCATCGTCCG TCTGGAGGCG GAGTCCACCG GCCAGCTGTG GGAGACGGCT CTCCGCGACG TTGAGGAGGT GGTGATCGCT GGGGACGATT CCGCGTTCTT CAAGGTCCGT GAGCAGCTCC GTGCCCGCAT CGAGCGGTTC CTCAGCCTGA GTGACGGCCC CGGCGCGGTG GACGTCCGCG TCTCAGAGCT GACGCGGGAC CATCTCCGCG AGGTCCTGCG GCTGTTCCTG TCTACCCAGC CCGGAGCGCA TGGTGTGCCG TTCAACCGGC TAAGCACGGG CTCGTTGAAC CTGCTCGTGT TCGCGCTGCT GACCTACATC GCCGAGCTGA AGGGCGACGA CTCGGTGATC TTCGCGATGG AGGAGCCGGA GATCGCGCTG CCGCCGCACG CCCAGCGCCG GCTGGTCGAC TTCGTCGTCA GCCGAATGGG GCAGGCGATC ATCACGTCGC ACTCGCCGTA CGTGATCGAG AAGTTCGACC CCGGCCAGAT CGTCGTCCTG AGCCACGACA GCACCGGCAC GCTCACCAGC ACCCCCATCA GTCTCCCGGA CGACTTCAAG CCGAAGAAGT ACCGCAACAA CCGGCGTCAG TTCGCCGAGG CTGTACTGGC CCGCGCTGTC CTCGTTGTGG AGGGCGCCAC GGAGGTGCTG GTCTTCCGGG CCGTCTCCGA CGTCCTCGAC CGCGACGAGA CCGCCGTCGG CTACCTGCAC CTGGACCTGG CCGGTATCTC GATCTTCGAT GCCGAGAACG ACGTGTCAGT CCCGGTGTTC GCCCCGGTCT TCGCCGGCAT GGGCAAGAAG GTCTTCGGCA TACACGACAC TCTGAACAAG CCTCTGGAAC CCGACGTGGC AGCGAAGACG AGCCGGTTCA CCCGGTACGT GGTCATCCCT TACAAGGGGA TCGAGGCGTT GCTGGTCACC GAGACACCCA TCGCTGTCCA GAGGCGGTTC GCTGTGTCCG TGACGACCCG CCTCGACTGC CCAAGGGGGG TGGGTCAGCT GGCGACGACG GCGACCGATG AGGAGGTCCG GTCACACGTC CGGGAACTTC TGCAAACGCA TAAGGGGTCG AACGGCTACG CGGCTCTGCT GATCGCTGAG TGCTCCGGCA AGGCCGAGCT GCCGCCCACC CTTGCCGCCT TCCTGACCTC CATCGACGCG GACCTCCGCC AGGAGCCGCC GGAGTCCGCT GACGTGGTAG CCGTCCCGGC GATCTGA
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Protein sequence | MQVCRVTLRH FRGVEAGTVY LDGDTLLVGS NSVGKSTVCE ALDLVLGPER MFRRPVIDEY DFFASQYQDV DGSLPEIRIE VVLTDLTPEA RRRFHGRMRR WSPRRRDFAE SAPAGDEGDS EDVWCLPVVF LGRFNPDEDD FEGSTFFAHP EPVVDDLTDE STELGGGLKP FTREDKRHCG FLYLRPNRTG SRALSFQRGS LLDTIVRLEA ESTGQLWETA LRDVEEVVIA GDDSAFFKVR EQLRARIERF LSLSDGPGAV DVRVSELTRD HLREVLRLFL STQPGAHGVP FNRLSTGSLN LLVFALLTYI AELKGDDSVI FAMEEPEIAL PPHAQRRLVD FVVSRMGQAI ITSHSPYVIE KFDPGQIVVL SHDSTGTLTS TPISLPDDFK PKKYRNNRRQ FAEAVLARAV LVVEGATEVL VFRAVSDVLD RDETAVGYLH LDLAGISIFD AENDVSVPVF APVFAGMGKK VFGIHDTLNK PLEPDVAAKT SRFTRYVVIP YKGIEALLVT ETPIAVQRRF AVSVTTRLDC PRGVGQLATT ATDEEVRSHV RELLQTHKGS NGYAALLIAE CSGKAELPPT LAAFLTSIDA DLRQEPPESA DVVAVPAI
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