Gene Franean1_2536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2536 
Symbol 
ID5670930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3014029 
End bp3015645 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content71% 
IMG OID641241451 
Producttransposase 
Protein accessionYP_001506872 
Protein GI158314364 
COG category[L] Replication, recombination and repair 
COG ID[COG5421] Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.58057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTCG CGATGGACTA CGGGCCGCCG AGCGTCGAGA AGCCGCTCGG CGCGCTCCCT 
GTCGTGCGTG ACTACCTGGC CCGCCTCGAT GTCGCGGGCA CGATCGATCG ACTCGCCCCG
ATGCGTGACA AGGTCAACCG GGCCACCCAC GGCGACGTGA TCGCCGCACT GGTCGCGAAC
CGGCTGACCT CGCCGACCCC GCTGCTGCAC GTCGAACGGT GGGCACGGGA CTGGGCGGTC
GAAGAGATGT TCGGTATCGC GCCGGACGTG TTGAACGACG ACCGGGTCGG TCGGGCGCTT
GACGCGCTCG CCCCGGTCTG CGAGGCCGTG GTCGGTTCGG TCGGTGCCGC GGCGATCGCC
GCGTTCGACC TCGACCTGTC CCGTGTCCAC TGGGACATGA CATCGATCTC GCTGCACGGC
GCCTATCCCG AGATCGACGG CGACTACGCG ACCCCGAAGT ACGGCCACCC GAAGGACCGC
CGCCCCGACC TCAAACAGGT CCAGACCGGG CTCGCGGTCA CCGGTGACGG CGGGATCCCG
CTGCTGCACC GCGCCTACGA CGGCGGCGCC GGTGAGGTCT GTCAGGTCAC CGGCGCGATG
CGGGCCCTGG CCGGGCTCGC CGGCCCCCGA CAGTTCCTGC TGGTCGGCGA CAGCAAACTC
GTCTCCTACG CGAATCTGAC CGCGTTGACG TCCACGCCCG GGGTCACGTT CCTCGCCCCG
GCACCGAAAA CCGTCGTGCC CGGCCAGGTC CTGGCCGCCC AGGACTGGGC CACCGCCACA
CTCGTCGGCT ATGTCGCGGC CCGTGACCAG GACAAACCCT TCCACCAGCG GGCGGCCTAC
CGTGTCCGGG AAGGCGTCAC CACCCTGCGG GGACCCCGGA AGAAAGACCC GCCGGTCACC
GTGCGCACGG TGTTCGTCTG GTCGTCGGCG AACGACCAGG CCGCGAAAGC CGCCCGCGCG
CTGAAACTCG GCCGCGCCCG CACCGACCTC GACACCCTCA CCCGCGCCGC GGGCAGCCAC
CACCTCTACC GCACCGAGGC CGCGGTGCAG GCCCGCCTGA CCCTCCTGGC GACGAAACAC
CGCGTCACCC GCTACCTCCA CGCCACCACC AGCGTCGACC CGGACACCGG GAAACCGGCC
CTGGCCTGGA ACTTCGACTC CGCCGCGCTC GACGCCGAGG CTGCCACCGA CGGCTGGTAC
GCGCTGCTGA CCAACCTGCC TGACGACGTC GGCCCGGCTG AGGTCCTCGC CCGCTACAAA
GGGCAGGAAG TCGTTGAACG TCGCTACGGC GCGTTCAAGG GCCCGCTCGC GGTCGCCCCG
ATGTTCCTGC ACTCCAACCA GCGGATCCAC GCCCTCATCC ACGTGATCTG CCTGGCCCTG
CTCGTCTTCT GCCTGGTCGA ACGCCAAGCC CGGCTCGGTA CCGGCCCTGA CGGGAAGATC
CCCGGCATCT ACGCCGGTCG TCCCGCCCGC CCCACCGGAG CACTGGTCCT CGGCGCACTG
AGCAGGCTGC GCCTCGTGCC CGCCCGCGGC GACCAGCCTG CCTACATCCC CCGCCCATCG
GCGCTGCACC AGCACCTCCT CGACATTCTC GGCGTCGATC CCACCCGGCC ACCTTGA
 
Protein sequence
MTVAMDYGPP SVEKPLGALP VVRDYLARLD VAGTIDRLAP MRDKVNRATH GDVIAALVAN 
RLTSPTPLLH VERWARDWAV EEMFGIAPDV LNDDRVGRAL DALAPVCEAV VGSVGAAAIA
AFDLDLSRVH WDMTSISLHG AYPEIDGDYA TPKYGHPKDR RPDLKQVQTG LAVTGDGGIP
LLHRAYDGGA GEVCQVTGAM RALAGLAGPR QFLLVGDSKL VSYANLTALT STPGVTFLAP
APKTVVPGQV LAAQDWATAT LVGYVAARDQ DKPFHQRAAY RVREGVTTLR GPRKKDPPVT
VRTVFVWSSA NDQAAKAARA LKLGRARTDL DTLTRAAGSH HLYRTEAAVQ ARLTLLATKH
RVTRYLHATT SVDPDTGKPA LAWNFDSAAL DAEAATDGWY ALLTNLPDDV GPAEVLARYK
GQEVVERRYG AFKGPLAVAP MFLHSNQRIH ALIHVICLAL LVFCLVERQA RLGTGPDGKI
PGIYAGRPAR PTGALVLGAL SRLRLVPARG DQPAYIPRPS ALHQHLLDIL GVDPTRPP