Gene Franean1_2422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2422 
Symbol 
ID5670818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2882885 
End bp2883511 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content75% 
IMG OID641241339 
Productprecorrin-8X methylmutase 
Protein accessionYP_001506760 
Protein GI158314252 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2082] Precorrin isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.230932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.795016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCT ACCTGCGCGA CGCCGACGAG ATCTACCGCC AGTCGTTCGC GACGATCCGC 
GCCGAGGCGG ACCTGACCGG CCTGCCCGCC GACCTCGCCC ACGTCGTCGT ACGCATGATC
CACTCCTGCG GGATGGTCGA TCTCGTCCGT GACATCGCGT TCTCTCCCGA GGTGGCCGCC
GCGGCGCGGG CCGCACTCGT CGGCGGCGCG CCGGTGCTCT GCGACACGGC GATGGTCGCC
GCCGGGGTGA TCCGCCGCCG GCTGCCCGCG GACAACCCCG TCATCTGCAC GCTCTCGGAC
CCGCGGGTCC CGGAGCTCGC CCGGCACTCG GGAACCACCC GCACCGCCGC CGCGGTGGAG
CTGTGGCGCG GCCGCCTCGA CGGTGCGGTG GTCGTCGTCG GCAACGCCCC GACCGCGCTG
TTCCGCCTGC TCGAACTGGT CGAGGACGGA GCCGGCCGGC CGGCCGCCGT CGTCGGGGTG
CCGGTCGGTT TCGTCGGAGC GGCGGAGTCC AAGCAGGCCC TGGCCGCCCA CCCGAGCGGG
CTTGAGTACC TCGTGGTGCA GGGCCGGCGC GGCGGCAGCG CGATGGCCGC GGCGGCCGTG
AACGCCCTCG CCCGCGACGC GGACTGA
 
Protein sequence
MTGYLRDADE IYRQSFATIR AEADLTGLPA DLAHVVVRMI HSCGMVDLVR DIAFSPEVAA 
AARAALVGGA PVLCDTAMVA AGVIRRRLPA DNPVICTLSD PRVPELARHS GTTRTAAAVE
LWRGRLDGAV VVVGNAPTAL FRLLELVEDG AGRPAAVVGV PVGFVGAAES KQALAAHPSG
LEYLVVQGRR GGSAMAAAAV NALARDAD