Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2379 |
Symbol | |
ID | 5670775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2830391 |
End bp | 2831731 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641241296 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001506717 |
Protein GI | 158314209 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0169963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCGACG TGCTGGCCGG CGAGAACGTG CTCGGCCGGG CCCGCACCGG CTCCGGCAAG ACCCTGGCGT TCGGCCTGCC GCTGCTCGCC CGGCTCGCCA CCACCGGCGC CGCCCGCCCC CGTCAGCCCC GCGGACTGAT CCTCGTCCCG ACCCGTGAGC TGGCCCAGCA GGTCAACGAC GTGCTGGCCC CACTCACCCG GGCGCTGGGG CTGTGGATGA CCCCGGTCTA CGGCGGAACG TCGATCAGCC GGCAGATCTC GGCCCTGCGC CGGGGTGTGC ACCTCGTCGT CGCCACCCCG GGCCGGCTCA CCGACCTGGT CGAGCGCGAC GCCTGCATCC TCGACGAGAT CGAGATCACC GTCCTGGACG AAGCCGACTT CATGTGCGAC CTCGGGTTCC TCCCGGCGGT CAAGGCGCTG CTGGACATGA CCCCGTCCGA CAGCCAGCGG CTGCTGTTCA GCGCCACGCT GGACCGCGAG GTCGAGGTCC TCGTCCGGGG CTACCTGCCC GAGCCGGTCC TCGTCGCCGT CGACCCGGAG GTGTCGCAGG TCTCGACCCT GGCCCGGCAC GCGATGGAGT CCGTCGACCG CACCGCCCAG CTCCGGCTGG TCACCGCGCT CGCCTGCGGC GCCGGCCGCA CCCTGGTGTT CGTACGCACC CAGCGTGACG CCGACCGCGT CGCGCAGGCG CTCACCGAGG CCGGGGTACC GGCCGAGCCC CTGCACGGCG GCATGCCGCA GGGGGCCCGC ACCCGGGCGC TCGCCGGGTT CACCGACGGG TTCTACCGGG TTCTGGTCGC CACCGACGTC GCCGCCCGCG GCATCCACGT CGACGGCATC GGCCTCGTGC TGCACCTGGG CCCGCCCGAG GACGCCAAGA CCTACCAGCA CCGCGGCGGG CGCACCGCCC GGGCCGGGGC CGACGGCGCC GACGTCCTGG TGACCGTGCC GGCCGAGCGT GGCAAGGCCC GGTCGCTGCT GCGGGCCGTG GGCATCCCGA CCCAGCCGGT CCCGACGCAG CCCGACGACC CGATCGTCGC CGAGCTCGCC GGACCGCCGG CGCCGCCGGT TGACCCGGCG ACCATCCAGG CCCGCCGCCA GCGCAGCGAC GGCCGGCGTG GTGACGGCCG ACGCGACGGT GGCGGCCGCC GGGACTCCGC CCGGCGCGAC GGCGCGCCGC GTGAGGGCGG CCACCGACGC GGCGGGCCGG GCGCCCGCAC CGCCGGCTCG ACCTTCACCG GGGCGGCCCG CGACGCTCAC CGCCCGGGCC GCCCGGCCCG GGGCTTGGCC CAGACGCGCC CCGCGCCGCG GGTGGACCCC CACCCCGCTC CCGGAGCCTG A
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Protein sequence | MPDVLAGENV LGRARTGSGK TLAFGLPLLA RLATTGAARP RQPRGLILVP TRELAQQVND VLAPLTRALG LWMTPVYGGT SISRQISALR RGVHLVVATP GRLTDLVERD ACILDEIEIT VLDEADFMCD LGFLPAVKAL LDMTPSDSQR LLFSATLDRE VEVLVRGYLP EPVLVAVDPE VSQVSTLARH AMESVDRTAQ LRLVTALACG AGRTLVFVRT QRDADRVAQA LTEAGVPAEP LHGGMPQGAR TRALAGFTDG FYRVLVATDV AARGIHVDGI GLVLHLGPPE DAKTYQHRGG RTARAGADGA DVLVTVPAER GKARSLLRAV GIPTQPVPTQ PDDPIVAELA GPPAPPVDPA TIQARRQRSD GRRGDGRRDG GGRRDSARRD GAPREGGHRR GGPGARTAGS TFTGAARDAH RPGRPARGLA QTRPAPRVDP HPAPGA
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