| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2352 |
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| Symbol | |
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| ID | 5670749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2798478 |
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| End bp | 2799362 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641241270 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001506691 |
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| Protein GI | 158314183 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.131161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGAC AGGACTGGCT GGCCGCGCGG TTCGACGGAC ACCGCGCGCA TCTGCGCTCG
GTCGCGTACC GGATGCTCGG CTCGCCGCAC GAGGCGGACG ACGCGGTGCA GGAGTCCTGG
CTGCGGTTCA GCTCGGCCGA CACCAGCGAC GTGGCGAACC TGCGCGGTTG GCTGACCACG
GTCACCGGCC GGGTCTGCCT GGACATGCTG CGGGCGCGCG GCACACGGCG AGAACAGCCG
TTGGACGTCC ACGTGCCGGA CCCGATAGTG GGCCCGGCGG ATGGTGTCGA CCCGGAGCGG
GAGGCACTGC TCGCCGAGTC GGTGGGGCTC GCCCTGCACG TGGTCCTGGG GACTCTCACC
CCTGCCGAGC GGCTGGCCTT CGTGCTGCAC GACATGTTCG CGGTGCCGTT CAATGACATC
GCGGCGATGC TCGGCAGGTC GACGGCGGCC ACCAAACAGC TGGCGAGCCG GGCCCGGGGA
CGGATCCGGG CCGGCGCGCC GCTGCCGGAA GCGGACCTGG CCCAACAGCA CGAAGCGGTC
CGCGCGTTCT TCGAAGCGGC CCGTGGAGGT GACTTCGACG CGCTCGTCGC GCTCCTCGCA
CCGAACGTCG AGATGCGCGC GGACGGCGGC GCTGCCCGGC CACAGGCCTC TACGGTGCTC
CGGGGAGCGG CGGCGGTCGC CGGCCGGGCG CTGATGTTCG CCCGGCCGGA CGCGGAGGTT
CACCCGGCCC TGGTCAACGG CGCCGCTGGC GTGGTCGTAA CTTTGGACGG CCGGGCAGTC
TCGATCATGG GATTCATCGT CCGGGGACGG ATGATCGCCG CGATCGATGT GCTCGCCGAC
GTCGACCGGT TGGGACGGCT CGAACTGTCC GCCTTCGAAC GCTGA
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| Protein sequence | MTGQDWLAAR FDGHRAHLRS VAYRMLGSPH EADDAVQESW LRFSSADTSD VANLRGWLTT
VTGRVCLDML RARGTRREQP LDVHVPDPIV GPADGVDPER EALLAESVGL ALHVVLGTLT
PAERLAFVLH DMFAVPFNDI AAMLGRSTAA TKQLASRARG RIRAGAPLPE ADLAQQHEAV
RAFFEAARGG DFDALVALLA PNVEMRADGG AARPQASTVL RGAAAVAGRA LMFARPDAEV
HPALVNGAAG VVVTLDGRAV SIMGFIVRGR MIAAIDVLAD VDRLGRLELS AFER
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