Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2323 |
Symbol | |
ID | 5670721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2772342 |
End bp | 2773271 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641241242 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001506663 |
Protein GI | 158314155 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTATGG ATGTGCATGT GCGGGACCTC CGTTACTTCG TGGCGGTCGC CGAGGAACAG AGCTTCACCC GGGCGGCGAG TCAGCGGCTG TTCATCTCGC AGCCGGCGCT GAGCAAGCAG ATCCGCCAGC TGGAGCAGTC ATTGCGGACC GTCCTGTTCG ATCGGGACCG GCGGACGGTC CGGCTGACTC CGGCCGGAGA GGCCCTGCTG CCCTACGCCC GGCAGCTCAC CGAGGACTGG GAGGCGGCGC TGCTCGCGGT GTCGGAGGCG TCGGCCCAGG CCGGGACGAC AGTGAGGGTC GGCTTTCAGA CGCGGATCGG TCGCGGGCTC ATCCCAGCCA TCACCGCGCG GATGCGACAG CGGCTTCCCG GCTGGAAGCT GATGTTCCGC CAGGTCTCCT GGGCCGACCC CACGGTCGGC CTGGCCCAGG GCGAGGTGGA CATCGCGATC GCCTGGCTGC CGGTACCCGA CACCGGCGCG CTTTCCTGGC GGGTCGTGGC GCGGGAGGAT GTCTGGGTAG CACTCGCGCC CCGACACCGC CTGGCCAGTC GGCCCATAGT GCCTTTCGCC GATCTCGCCG ACGAGCCCTT CGTCGCGCTG CCGAGGACGG CCGGCGCCCA GCGGGACTTC TGGCTCGGGG CGGCGGCCCG GCGGTCCCCG GCCGTCATCG CGGGGGAGGC CGAGACCGCC GAGGAGTCGT TCGAAGCGGT CGCCTCCGGG ACAGGGATCA CCCTGCTTTC CGCTGGCAAC GCCGAGATCT ACCACCGCGA CGACGTCGTC TGCCGGCCGG TCAGCGGACT GCCGCCCAGC GAACTGGCCG TCGTCTGGCG AACGGTCGAC AACCGACCGT TCGTCGACGT CTTCGCCGAC ATCTGCCGTG CCTGCTCCAG CCCCGCGGCC GAGGCTGGTA AGTGCGACCC GTCACTGTGA
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Protein sequence | MVMDVHVRDL RYFVAVAEEQ SFTRAASQRL FISQPALSKQ IRQLEQSLRT VLFDRDRRTV RLTPAGEALL PYARQLTEDW EAALLAVSEA SAQAGTTVRV GFQTRIGRGL IPAITARMRQ RLPGWKLMFR QVSWADPTVG LAQGEVDIAI AWLPVPDTGA LSWRVVARED VWVALAPRHR LASRPIVPFA DLADEPFVAL PRTAGAQRDF WLGAAARRSP AVIAGEAETA EESFEAVASG TGITLLSAGN AEIYHRDDVV CRPVSGLPPS ELAVVWRTVD NRPFVDVFAD ICRACSSPAA EAGKCDPSL
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