Gene Franean1_2275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2275 
Symbol 
ID5670674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2717152 
End bp2717742 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content74% 
IMG OID641241195 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001506616 
Protein GI158314108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.187193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0620251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCAACG ACCTGCGCGG CCGGGGCGCC GCGTTCCTCG ACTTCTGGCG TGAGCGGCAT 
CTGTGCACCC TGACGACGGT GCGCCCGGAC GGCACGCCGC ACGTCATCGC TGTGGGCGTC
ACGCTGGACG TGCAGGCCGG TGTCGCCAGG GTGATCACGT CCCGCCGGTC ACGCAAGGTC
AGGCTGCTGG CCGGGCGCGG CGGGCTGGAC GCAGCCGGGC GGGTCGCGGT GGCGGGCGCG
GGCTCGCGGG TCGCGGCGGT TCCTCCCACG ACTTCCGGCG CGGGCGAAAA GCCTTCTGCT
AACGGTGAAA TGCCTGGTCG GCCGCCGTGG AACTCCCTGG CTGACCGGGG TGTGGAGCCG
GTCGGCGGTG CGTCCGTGGC GGCGTCGGGT CGGGTCGGTG TGCCGGTCGC GGTGTGTCAG
GTCGACGGCG GGCGGTGGTC GACGCTTGAG GGGTTGGCGG TCGTCCGGGA CGATCCCGCG
TCGGTCGCCG AGGCGGAGCG CCGTTACGCC GAGCGGTACC GCACCCCTCG CGTGAACCCC
GACCGGGTCG TGGTGGAGAT CGGGGTGACC CGGGTCCTCG GCTCGGTGTG A
 
Protein sequence
MSNDLRGRGA AFLDFWRERH LCTLTTVRPD GTPHVIAVGV TLDVQAGVAR VITSRRSRKV 
RLLAGRGGLD AAGRVAVAGA GSRVAAVPPT TSGAGEKPSA NGEMPGRPPW NSLADRGVEP
VGGASVAASG RVGVPVAVCQ VDGGRWSTLE GLAVVRDDPA SVAEAERRYA ERYRTPRVNP
DRVVVEIGVT RVLGSV