Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2254 |
Symbol | |
ID | 5670653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2693231 |
End bp | 2694754 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641241174 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001506595 |
Protein GI | 158314087 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0213589 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCAAG GAGAGTCCAT GTCCCAGCCC TTCCCATCAC CGGCGGCGGC GAGCCCGGCT GCTCCCGGCC GGACATCCCC ACCTCCCGAT GTGGGAGCCC CGCGGGCCGC CGGCTCCCGG CTGCTCGCGC TGTGTGTCCT GTGCGCGTCG ATGCTCATGG TCATCCTGGA CGGCACCATC GTCACGGTCG CGCTGCCCAC CATTCAGGAT GACCTGGGCT TCTCCGCGTC CGGTCTGGCG TGGGTCGTCA ACGCCTACCT GGTTGCCTTC GGTGGTCTTC TGCTGCTGGC CGGCCGCATG GGGGATCTCG TCGGCCGCCG GCGGGTCTTC GTCACCGGAC TGGTGCTGTT CACCGTGGCC TCCCTGCTCT GCGGGCTGGC GACCGGGGCG GGCACGCTGA TCGCCGCTCG GTTCGTGCAG GGCGTCGGCG GGGCGCTGTC CTCGTCGGTG GTGCTCGGGA TGATCGTGGT GGCCTTCCCC GAGCCCCGGG AGCAGGCACG GGCGATCGGG GTGTTCAGCT TCGTCGGCGC CGCCGGGGCG TCGATCGGCC TGCTCGCCGG CGGCCTGCTC GTCGAGACGC TGACCTGGCA CTGGATCTTC TTCGTGAACG TGCCGATCGG CGCGGTCGCG GTCGTGCTGT CGCTGCGGGT GCTGCCCACC GAGCGCGGTC CCGGCCTGCG CGCCGGCGCG GACGCTCCCG GGGCGGTGCT GGTCACCGCG GGTCTCATGC TCGGCGTCTA CACGATCGTC GGCACCGCCG ACGCGGGCTG GGCCTCCGCC CGGACCATCG GCCTCGGCGC ACTCGCCCTC GCCCTGCTGG CCGCCTTCGC CGCCCGCCAG GCGACGGCGG CTCACCCGTT GCTGCCGCCA CGGCTGTTCT CCTCCCGGCC GCTGACCGTC GCGAACATCG TCCAGACGCT GATGGCCGGC GGGCTGTTCG CCTTCCAGTT CGTGCTCGCG CTGTTCCTGC AGCGTGTCCT CGGCTACGGG CCGGCCGAGA CGGGCCTGGC GTTCCTGCCC ATCGCGGCGA CGATCGGCGC GTTCTCGCTC GGGCTCTCGG GACGGCTCGC CCACCGCTTC GGCGCGGGCC TGGTGCTGCT GCCCGGTCTC GTCCTGCTCG GCCTCGGCCT GTGGCTGCTG TCCCGCCTGG CCCCGGACGC GGCCTACGCG ACGGACGTGC TGCCGGTCGC GGTCGTCCTG GGGTGCGGCG GCGGCCTGAC GCTGCCGGCG CTCACCCAGC TCAGCATGAC CGGGGTGCCG CCGGACGACG CCGGGCTCGC CTCCGGCCTG GCCAACACCA CATTGCAGGT CGGCGGGGCG CTGGGGCTGG CGGTCCTGAC CACGCTGGCG GCGTGGCGCA CCGGGAACGC GGCGGACGGC GGCGCCGGGC CGGCGGAGGC CCTCACCGCC GGCTACCACC TCACCTGGAT CGGCGGCGCC ATCCTGATGG TCGCCGGACT GCTCCTCACC GTCGCCTTCC TCCGGCCGGA CGGGAGCCGG AAGCAGAGTT CCGCGGACGG TTGA
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Protein sequence | MPQGESMSQP FPSPAAASPA APGRTSPPPD VGAPRAAGSR LLALCVLCAS MLMVILDGTI VTVALPTIQD DLGFSASGLA WVVNAYLVAF GGLLLLAGRM GDLVGRRRVF VTGLVLFTVA SLLCGLATGA GTLIAARFVQ GVGGALSSSV VLGMIVVAFP EPREQARAIG VFSFVGAAGA SIGLLAGGLL VETLTWHWIF FVNVPIGAVA VVLSLRVLPT ERGPGLRAGA DAPGAVLVTA GLMLGVYTIV GTADAGWASA RTIGLGALAL ALLAAFAARQ ATAAHPLLPP RLFSSRPLTV ANIVQTLMAG GLFAFQFVLA LFLQRVLGYG PAETGLAFLP IAATIGAFSL GLSGRLAHRF GAGLVLLPGL VLLGLGLWLL SRLAPDAAYA TDVLPVAVVL GCGGGLTLPA LTQLSMTGVP PDDAGLASGL ANTTLQVGGA LGLAVLTTLA AWRTGNAADG GAGPAEALTA GYHLTWIGGA ILMVAGLLLT VAFLRPDGSR KQSSADG
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