Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2246 |
Symbol | |
ID | 5670645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2684842 |
End bp | 2686065 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 641241166 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001506587 |
Protein GI | 158314079 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.14079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00792288 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCCTCGC CCGCGGTGGC GTTCCCGCGG CGCCCCCGTC TGGTGGCGTT CGCCGTCTCA TTGATCATCG CCTGGCTGCT GCTCGGGCTG GGGGCGCTCT GGCTGCGGCG CGGGCCGATC GAGAATGACC TGACCGGCCG GGCGGCGGAC GCCGTCCGCG CCGCGGGCGC CACCCAGGTG CGGGTCAGCG CCGAGGGCCG GGAGATCGTG CTGCACGGCC GCTTCGACAG CGCCGAGGAC GCCCGCCGGG CGCGGGCGGC GGCCGCCGTC TCGGGCAGCA GCTCCGTCCG GCTGGCCGCG GACGCCGTCA TCGCCTCGGA GCCGGCGCAG CCCCTCGTGG TCGGGGTGGA GCGCGCCGGC CGAGCGCCGG GCGGGGTGGT GCTGAGTGCG ACCGTGCCGG ACAGTGCGAC CCGGGCCGCC CTGCTGGGCG CGGCGGCGGA CGCCGCCGGC GGCGTCGTCT CCGCGACGGT CACGGTCGAC CCGCGGGTCG CGACGCCGGC CGTGGAGGCG TTCGGTGACG TGGCGAAGGC GTTGGGCACC GGGCCGGGCG TCCGCTCGGT GACGATCGAC GGCTCGTCGG TCGTGCTGTG GGGGAGCGCC CCCGACGACG CGGCACGGGC GTCGATCGGG GCGGCGGTCC TGGCCGCGGC CCGGCAGTCG ATCCCTGGCG CGTCCCTGGA GAACCGGCTT GCCGTCGGCT CGGGCGCCAC CGTGACCCTC GACCCGGCGA CGGGCGAGAT CGTCCGGCCG GCCGCACCGG CCCCGGCCAC CGCGCCACGG TCGGCGCCGA CCCCGGCCCC GGCGACCGCG CCGGCACCCG GCACGACCGG CGGCGCCGGG CGGGCCGCCG CTGGCAGCGC GGACAGCACC CGGGCGGCGC TGCGGGCGGC GCTCGACGGC ACTGCCCTCA CCTTTCCGGT GGGCGACACC GTCCTCGGCG CCTCGACGCG CTCCGGTCTG GACAAGGTGG CCCGCGCGTT GCTGCCCGGC GACCTGACGG TGATCGTCGG CGGGCACACC GACAGCACCG GTCCGCGGGC CCTCAACCAG GCGCTCTCGA TCGACCGGGC CCGCGTCGCG CGCGAGTACC TGGTGATGCG GGGGGTTCCC GCGGAGCGGA TCCGTGCGGC CGGCTTCGGC CCGGACCAGC CGATCGCGGA CAACGCGAGC ACGTCCGGCC GCGCGGCGAA CCGCCGGGTC GACGTGACTC CGGTCGCCGA CTGA
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Protein sequence | MSSPAVAFPR RPRLVAFAVS LIIAWLLLGL GALWLRRGPI ENDLTGRAAD AVRAAGATQV RVSAEGREIV LHGRFDSAED ARRARAAAAV SGSSSVRLAA DAVIASEPAQ PLVVGVERAG RAPGGVVLSA TVPDSATRAA LLGAAADAAG GVVSATVTVD PRVATPAVEA FGDVAKALGT GPGVRSVTID GSSVVLWGSA PDDAARASIG AAVLAAARQS IPGASLENRL AVGSGATVTL DPATGEIVRP AAPAPATAPR SAPTPAPATA PAPGTTGGAG RAAAGSADST RAALRAALDG TALTFPVGDT VLGASTRSGL DKVARALLPG DLTVIVGGHT DSTGPRALNQ ALSIDRARVA REYLVMRGVP AERIRAAGFG PDQPIADNAS TSGRAANRRV DVTPVAD
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