| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2236 |
|---|
| Symbol | |
|---|
| ID | 5670635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 2672904 |
|---|
| End bp | 2673683 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 641241156 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001506577 |
|---|
| Protein GI | 158314069 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.006058 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGCTTGCCG ACCTGCCCGC TTCCCCGCGC TCCGGCGTCC TCGCCGGCTG GGGCAACGCC
TGGCTGGCCG GACTCGTCGG CCTCGACGAC GTCATCACCC AGGTTCACGA GGCGCTGGGC
GGCAGTGCGC CGCACACCGT CGGTGACGAA CCTCTGGTCC TCGGCCTCGG AGCGCTGCGC
CGCGCCGGAG CCGAACGGAT GCGCCTGGTG CTCCCGGTGC CCGGTGACGT GAGCGGCCTG
CCGGGTCCGC CCGACGTGAA CAGGGACGCG CTCACCGCCG GCGAGGCGCT GGTCGTGATC
GGGCCCACGC CCCCGCTCGT CCTCGTCCCC ACCGTGATCG TGCACGGCCC GGCCGTCGAG
GGCGGCCTGG AGTCCGTGCA CTGGCGGGTG CTGCGGGCCG GCCGGGTGCC ACCGCCACCC
GCCGGGCTGC GCGCCGCCGA CCACGAGCTG TCGGTCGCGA TCAGGCAGAC CACGGCGGCG
CTGGTGGACC TCGACATCGC CAGCGCCCGG CCGGAGGTGC TGGCCCTGCT GCGCGACCGC
GGCGAGCCCG AGCCCGGCCC CGGGCTGGGG CCGGGCTACC CGCCGAACGC GCACGCCCTG
CTGGCCCGGG CCGAGCGCCT CGCCGAACTG CTGGAGCTCG CCGCCCGCGA CGACGGCGCC
GCGGTCACCG CGACCGAGGT CAGCCGCCGC TCCGCGGCGC TACGGGGCCT CTCCGCCGCC
GTCCGGCGGG CCTACGAGGC GGCCTACGAC GCCTTCGACC CGGCCTACGC CAGCCACTGA
|
|---|
| Protein sequence | MLADLPASPR SGVLAGWGNA WLAGLVGLDD VITQVHEALG GSAPHTVGDE PLVLGLGALR
RAGAERMRLV LPVPGDVSGL PGPPDVNRDA LTAGEALVVI GPTPPLVLVP TVIVHGPAVE
GGLESVHWRV LRAGRVPPPP AGLRAADHEL SVAIRQTTAA LVDLDIASAR PEVLALLRDR
GEPEPGPGLG PGYPPNAHAL LARAERLAEL LELAARDDGA AVTATEVSRR SAALRGLSAA
VRRAYEAAYD AFDPAYASH
|
|---|
| |