Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2189 |
Symbol | |
ID | 5670589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2622262 |
End bp | 2623173 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641241110 |
Product | 3-hydroxybutyryl-CoA dehydrogenase |
Protein accession | YP_001506531 |
Protein GI | 158314023 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.215522 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGAGA CCCAGGCGGA GCAGGCACAG ACCGCGAGCG AGACCCCGGT GGCCGGCGAG ATCCGGCGGA TCGGCGTCGT CGGATGCGGT CTGATGGGCT CCGGAATCGC CGAGGCGTGC GCCCGGGCGG GACTCGACGT CCTGGTCCGG GAGGTCGACG CCGGCGCTGC CGAGGCCGGC CGCCGCCGGA TCACCGCCTC GCTGGACCGC GGCACCCGCA ACGGCAAGCT CCAGGAGGCC GACCGGGACG CGGCGCTGGC CCGCCTGTCG TTCACCACCG ACCTCGGCGA CTTCGCCGAC CGCCAGTTCA CCGTCGAGGC CATCGCCGAG AACGAGCAGG TCAAGACCGA GATCTTCGCC GCGCTCGACA AGGTCGTCGC CGACGACTCC GCGATCTTCG CCTCGAACAC GTCGTCCATC CCGATCATGA AGCTGGGGAT GGCCACCAGC CGGCCGGACC AGGTCCTCGG CGTGCACTTC TTCAACCCGG TGCCGGTGAT GCGGCTGGTG GAGCTCGTCC CGTCGCTGCT CACCTCGGAG CAGACCCTCG CCCGCGCCCA GGCGTTCGTG ACCTCCGCAC TACACAAGGA CGTCATCCGC TCGCAGGACC GCGCCGGCTT CGTGGTGAAC GCGCTGCTCG TGCCCTACCT GCTCTCGGCC ATCCGGATGC AGGAGTCCGG CTTCGCCTCC GCGGAGGACA TCGACCTCGG CATGGTGCTC GGCTGCGCCC ACCCGATGGG GCCGCTGCGG CTGATCGACC TGATCGGGCT CGACACGGTG AAGGCCGTCG CCGAGTCGAT GTACGAGGAG TTCAAGGAGC CGCTGTACTC GCCGCCGCCG CTGCTGCTGC GGATGGTGGA CGCCGGCCTG CTCGGGAAGA AGACCGGGCG CGGCTTCCAC AGCTACGCCT GA
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Protein sequence | MAETQAEQAQ TASETPVAGE IRRIGVVGCG LMGSGIAEAC ARAGLDVLVR EVDAGAAEAG RRRITASLDR GTRNGKLQEA DRDAALARLS FTTDLGDFAD RQFTVEAIAE NEQVKTEIFA ALDKVVADDS AIFASNTSSI PIMKLGMATS RPDQVLGVHF FNPVPVMRLV ELVPSLLTSE QTLARAQAFV TSALHKDVIR SQDRAGFVVN ALLVPYLLSA IRMQESGFAS AEDIDLGMVL GCAHPMGPLR LIDLIGLDTV KAVAESMYEE FKEPLYSPPP LLLRMVDAGL LGKKTGRGFH SYA
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