Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2078 |
Symbol | |
ID | 5670479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2503487 |
End bp | 2504542 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641241000 |
Product | cytochrome oxidase assembly |
Protein accession | YP_001506421 |
Protein GI | 158313913 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.7047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGCGC GCACCCCTTG CCACGGACTC GGGCGGATTA CTATGACCGC GATGCCAACT TCTACCGATC GTCGGAGCAA GCCCCGCGAG AGCGGCGGCG CCAGCCAGCC GGACACCACC ACCGGCCGGC TGCCGGTGAT CGGGCTGCGC GCCTTCCGCC GGCTGACGCT GGCCAGCGTC CTCCTGCTCG CCGCGATCGT GGTGACCGGC GGCGCCGTCC GGCTGACCGG CTCCGGGCTG GGCTGCCCCA CCTGGCCGCA GTGCGGCGAC GGCTCCTTCA CCCCGCACTC GGCGTACGCC CTCAACGGCG CCATCGAGTT CGGCAACCGG GTCATCAGCA TCGTCGTCGG CCTGGTCGTG CTGGCCCTGC CGCTCGCGGC CCGGCGGCTG CGCGAGCCGC GCCGGGACCT GCTGCTGCTC TCCCTCGGCC TGTGGCTCGG CTTCGTCGGC CAGGCAGTGC TCGGCGGGAT CACCGTGCTG GTGAAGCTGC ACCCGGCCAC CGTCGCCGCG CACTTCCTGC TGTCGATGGT CCTGCTGTTC AACGCCGTCG CGCTGCACCG ACGAGCCCGG CAGGCGGCCG GGCCGACTCC GCACGCCGTC CGCCCGGAGC TGCTCTGGCT CGCCAGGCTG CTGATGACCG TGGCCGGCGG CGTGCTCGTC CTCGGCACCG TCGTGACCGG CACCGGGCCG CACAGCGGCG ACAGCGAGGA CACCAAGCGG TTCGGCTTCG ACATCGTCAA CGTCGCCCAG CTCCACGCCG ACGGCGCGAT GATCCTCACC GGCCTCACGG TTGCGATGAT CTTCGCCGTC CGGCTGGCAT CCGCCCCGGC GGAGGCCAGC CGCAGCGCCA ACGCGCTCGC GCTGACCGTC GTCGCCCAGG CCGCGATCGG CTTCACCCAG TACTTCGCCG GCATCCCGCC GCTGCTCGTC GCCCTCCACA TGGCCGGCGC GACCATCATG TGGATCGTCA CCGTCCAGCT CTGGCTCGCC ATGAGCGAAC GCCCCCCGGC CGGCGAGAAC GCCTGGACGG GCTCCCGCCA ACTCGCCGCC GGTTGA
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Protein sequence | MAARTPCHGL GRITMTAMPT STDRRSKPRE SGGASQPDTT TGRLPVIGLR AFRRLTLASV LLLAAIVVTG GAVRLTGSGL GCPTWPQCGD GSFTPHSAYA LNGAIEFGNR VISIVVGLVV LALPLAARRL REPRRDLLLL SLGLWLGFVG QAVLGGITVL VKLHPATVAA HFLLSMVLLF NAVALHRRAR QAAGPTPHAV RPELLWLARL LMTVAGGVLV LGTVVTGTGP HSGDSEDTKR FGFDIVNVAQ LHADGAMILT GLTVAMIFAV RLASAPAEAS RSANALALTV VAQAAIGFTQ YFAGIPPLLV ALHMAGATIM WIVTVQLWLA MSERPPAGEN AWTGSRQLAA G
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