Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2077 |
Symbol | |
ID | 5670478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2502711 |
End bp | 2503178 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641240999 |
Product | hypothetical protein |
Protein accession | YP_001506420 |
Protein GI | 158313912 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.398465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.255924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGGCG GCTCGGGATT TGTGGGCGCT CACACGATTG CCGCGCTGCT CGCCCAAGGT CATCAGGTTC GCACGACGAT CCGATCATGG TCACGGGTGG ACGACGTCCA GGAGATGGCC ACCCGTGGCG GGGCCGAGCC GGACGAGCGG TTGTCGTTCG CGGTCGCAGA CCTCACCCGG GACGATGGTT GGGCCGAGGC GGTCGCGGGC TGTGAAGTGG TCCTGCACGT GGCCTCGCCG TTCCCGGGGG GCCCGCCGGA GCACGAGGAC GAGGACGAGC TGATTGTTCC CGCCCGCGAC GGCGCGGGTG CTGCGCGCCG CGTGGGACTT CGTGCGGCGC GAAGGCGGAA CGCTGGAACT TGCGGTGATC AACCCGGTCG GGATCTTCGG GCCGGTGCTG GGCGCGGACT ACTCCAGCTC CATCGAGCTC GTACGACGCC TACCCGCCAT CGCTCACCTG CTGCGTGA
|
Protein sequence | MTGGSGFVGA HTIAALLAQG HQVRTTIRSW SRVDDVQEMA TRGGAEPDER LSFAVADLTR DDGWAEAVAG CEVVLHVASP FPGGPPEHED EDELIVPARD GAGAARRVGL RAARRRNAGT CGDQPGRDLR AGAGRGLLQL HRARTTPTRH RSPAA
|
| |