Gene Franean1_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1991 
Symbol 
ID5670392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2394325 
End bp2394966 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID641240912 
Producthypothetical protein 
Protein accessionYP_001506334 
Protein GI158313826 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00244164 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.308842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTCCGG GCGGTCGGCG CGTCCCGCGG GCGGTTGCCG TGAGACGCGG ACGGCCCGTC 
GGAAGGAGGG AGCGGGCCGA ACGACCAGAA CCTAGTACCG CAATCGGACA TCTCGAACTG
TCCACGCCGG AGGATCCAGT GATCTCGTCG AGTTTTTGGT TCGTTGCCCC TGTTTTTTTG
GAGTGTTGTC GCCGTAGGGG TGGAGCTTCG GGCGTTTCAG CGCCCGGACT TGGAACGGGG
GCCGGAGCGC GATCCGCCGC CGGAGCGGCG GGCCCGCGAG CGCGTGCCGA CGTCCACCTG
CCGGGCGGGG CCGGCGCCGG CGGCGACGTT CTCCAGGTCG GCGGTGATGC TGCTGTTGAT
GAGCCCGACC GTCCGGTCAC GGTCGCCGTC GTCGAGGCCT TCGAGCAGGC TGTGTATCAG
GCTCACGATG TTCCTCCACG CTGCGGGGCG ATCTCGGGGT TCGTGCGTCT GCTGCCCGGA
CCGAGCGTGT TAAAGCGTGC GATCGCCGCT TTTTCCCGGC GACAAGGGTC CCGGCGCCAG
GAGCCTGGCG GCCAGGAGCC TGGTGGCAAG GACCCTGGTG GCGAGGATCA GGGCGCCGGC
GAGAGGCCCC CGTCGAGGTT GATGCCGACG CCGGTCAGGT AA
 
Protein sequence
MVPGGRRVPR AVAVRRGRPV GRRERAERPE PSTAIGHLEL STPEDPVISS SFWFVAPVFL 
ECCRRRGGAS GVSAPGLGTG AGARSAAGAA GPRARADVHL PGGAGAGGDV LQVGGDAAVD
EPDRPVTVAV VEAFEQAVYQ AHDVPPRCGA ISGFVRLLPG PSVLKRAIAA FSRRQGSRRQ
EPGGQEPGGK DPGGEDQGAG ERPPSRLMPT PVR