Gene Franean1_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1967 
Symbol 
ID5670368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2363404 
End bp2364006 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content73% 
IMG OID641240888 
ProductABC daunorubicin resistance transporter, ATP-binding component 
Protein accessionYP_001506310 
Protein GI158313802 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.271154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA CCTACTCGGG CGGGATGCGC CGCCGGCTGG ACATCGCCGC GAGCCTCGTC 
GTCACCCCCG ACCTGATGTT CCTCGACGAG CCGACCACCG GCCTCGACCC GCGCAGCCGT
GCCCAGGTGT GGGACATCGT CCGGGCACTG GTCGCCGGTG GCACGACCGT CATCCTCACC
ACCCAGTACC TGGACGAGGC CGACCAGCTC GCCGACCGGA TCGCGGTGAT CGACCACGGA
AGAGTGATCG CCGAGGGCAC TCCGGGCGAA CTGAAGTCCT CGGTCGGTTC GGGCACCCTC
CACGTGCGCG TCCGCCGGCC CGAGCGGCGG GCGGACGCCG AGCGCCTGCT CACCGGCGCG
CTGGGCGTCC CCGTCCGGTA CGAGTCGGAC CAGGTGGCGC TCTCCGCCCG GGTCTCGGAC
GGCGAGCCCG TGGCGGAGGC GCTGGCGGGG CTGAACCGCG CGGGCATCGA GCTGACCGAG
TTCGCGCTCG GCCAGCCGAG CCTGGACGAG GTCTTCCTCG CCGTCACCGG CCATCCGGCC
GATGACGGCG CGCCCACCCC CACCGAGACC ACCACCGACA CGAACGGAGC GAGGGTCGCA
TGA
 
Protein sequence
MAKTYSGGMR RRLDIAASLV VTPDLMFLDE PTTGLDPRSR AQVWDIVRAL VAGGTTVILT 
TQYLDEADQL ADRIAVIDHG RVIAEGTPGE LKSSVGSGTL HVRVRRPERR ADAERLLTGA
LGVPVRYESD QVALSARVSD GEPVAEALAG LNRAGIELTE FALGQPSLDE VFLAVTGHPA
DDGAPTPTET TTDTNGARVA