Gene Franean1_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1942 
Symbol 
ID5670343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2332247 
End bp2333320 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content73% 
IMG OID641240863 
Producthypothetical protein 
Protein accessionYP_001506285 
Protein GI158313777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.116952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACCGGT GCCACGAGGG GGTGGGGAGC TGTGTGTACA TCGCTCGCCG CCAGCACGGG 
CTGATCACCA CCCGACAGGC CCTCGGCGCG GGCCTCACGC CAGATCTCCT GCGGCACCTG
GTGCGCTCTG GGATCTGGCT GCACGCCCGG CAGGGCATCT ACGTTCTCCC CGGCGCCACG
TTGAGCGCGG ATGGCGAGAT CGGCGGCCGC CGGTCTGATC ACGGCCCGCC GCCTCACTCC
GCGCCGTGGC AGCGAACCAT TCCGGGGATG GCCACCACCA CGGCGCCCTT CTGGCCGGCC
GTCGATTTCA CCGACTCGGC CGCTAAAGCC CGGTTGCCGC TTCGGCTGCG CGTTCGCGCC
GCGCTTCTGG CCCGTCCCGG CGCGGTGGCG TGTGGCGTGA CGGCCGGCCG GCTGCTGGGC
TTCGAGGGTC TTCCCAGGCC CGCCGACAAC GAGCCGGTGC ACCTCCGGCT GCCGGTTCAC
GGTTCCCGGA AGCAGATGGA GGGAACGATC AGCCACTTCG GGCCGGTCGG GGCCGACGAA
CTGGTCGATC TCGACGGCAT CCCCGTCACC GGCCCGGACC GGACCCTCGC GGACCTCGTC
CTGGCCAGCT CACGCGACGA CGCGATCGCG ATGATCGACG CGGCGTTGCA CTGCGGGCTG
GTGGCGGGGC TGGGCAAAGC GATCGCGGCC TGCGCGAAGC GCCCGGGAGC CCGTCGGGTG
TCCTCCTACT GGGCGCTCTC GGACGGTCGG GCCGAGTCCG TGCTCGAGAC CCGCCTGCGG
CTTCTGCTTC ACGACGCGGG TGTGCCTCCG CCGCGCCTGC AGTGGCCCGT CACCGACGGC
GCGGGGCGGG TCCTGGCCCG GCTCGACCTC GCCTGGCCCG GCGAGATGCT CGATGTCGAG
GCGGACGGCG GGGCCGTCCA CGAGCTGCCG CCGGCTCTGC ACCGGGACCG CGAGCGGCAG
AACCAGCTGC TGGACCTGGG GTGGCGGGTC CGGCGGGTCA CCTGGGCCGA CGTGCTGCGC
TCACCGTCGA AGGTCGTCGC CGCCGTCACC GGATGGCTGG CAGCAGGCCC GTGA
 
Protein sequence
MHRCHEGVGS CVYIARRQHG LITTRQALGA GLTPDLLRHL VRSGIWLHAR QGIYVLPGAT 
LSADGEIGGR RSDHGPPPHS APWQRTIPGM ATTTAPFWPA VDFTDSAAKA RLPLRLRVRA
ALLARPGAVA CGVTAGRLLG FEGLPRPADN EPVHLRLPVH GSRKQMEGTI SHFGPVGADE
LVDLDGIPVT GPDRTLADLV LASSRDDAIA MIDAALHCGL VAGLGKAIAA CAKRPGARRV
SSYWALSDGR AESVLETRLR LLLHDAGVPP PRLQWPVTDG AGRVLARLDL AWPGEMLDVE
ADGGAVHELP PALHRDRERQ NQLLDLGWRV RRVTWADVLR SPSKVVAAVT GWLAAGP