| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1938 |
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| Symbol | |
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| ID | 5670339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2326669 |
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| End bp | 2328831 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641240859 |
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| Product | putative integral membrane protein |
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| Protein accession | YP_001506281 |
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| Protein GI | 158313773 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0809155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGGACA GCCCCCGGCG TCGGGCGGGC CAGTGGGGGC TGGCCGTGTT GCTGGCGCTC
CTCTGGCTGC CCTTCGTCGT GCTCGCCACC TCGCGCACGA CCGTTCTGAG CGCGGACTTC
TACTCCCAGG CGCTCACCGA GGCGAACGCC TACGACCGCC TCTACACCGA GGTGCTGCCC
GACCCCGCCG TCGAATCCCT GCTCTCCGGC CTGCCCGTCG ACCCCACCCT GGTCACCGCG
AACCTGCGCA CGGTGCTGCC GCCGTCGACG GTGGAGGCGA TGACCGACGA GCAGATCGGG
CGCATCGTCG ACTACCTGCG CGCGCGCCAG GACGACATCG AGTTCAGCGT CGACCTGACC
CCGATCTTCG GCAACATCTC CGGCCTGGCC AACCGCTACA TCGCGGGCGA GATCGGCACC
GGCACGAGCT ACCAGGTCGA GTCGGTCACC CAGTTCACCC GCTCCGTCCT CGACGCGCTC
GACGACATCG TCGCCGGTCG ACCGCCCACC GCGCTGCCCA CCATGGAGCT CTCGGCGCAG
GACACCGACC GGGTGGTGGA GGCGGTGCTC GGCCGGCTGA AGCCGGCGGA CCGCGACGCG
GTGGCCGCCC CCCTGCGCGC GGACCTGCGC TCCGGTGACG TGGCCGGAGC GCTGGCCCGG
GTCGGTCCGC TGCTGTTCGA GGGCGACGAG CGGGCGGTCG GCGAGATGCG CGCCCACCTC
ACCGACGGTG CCGTGCTCAA CCTGGGCGTC CGCCTCTCCG ACCTGCGCGA CGAGCCCGCG
ATCAGCGCCG TGTCCAAGCT GCACGACGTC TCGGCGGCGC TCGACGGGCT CAGCCTGGCG
CTGCTGGGCC TCGCCGGGCT GATCTGCGTG GCGATCGTCG CACTGGCAGC CGCCCGCGGC
CGGTCCCGGA TGCGGGCGCT GGCGGGGGCG GTCGTCGTCG CCGGGGTCGC GGCGGGCGTC
CTGGGCGTGG TGCTGCGGAT GCTGCTGCCT AACCCGCTGC TCGCCCTGGA GAAGCCCGGT
GGGCCGCTGC CGCCCGGCGC CGGCGCGGTG CTCGCCGACT TCTCCCGGCA CGCGTACGGC
GACATCGAGT CCGACTACCT GCGCATCGTC GCCTGGACGC TCGCGGTGGG GCTGGCGATC
CTCGGCGGCG CGCTGCTCGT GGCACTCTCC GCGCGCTGGG GCCGGGCCGG CCGGCGCCGC
CGCCTCGCCG CCGGCTTCGC CGTGGCCGCC CCGATGATGA TCGTGCTGAC CTGGCTCGCC
TTCCCCGGTG CCGCGGCGAA CGCGCGGGAG CTGTGTAACA GCCAGGTCCG CCTGTGCGAC
AGCCGGTACG ATGAGGTGAC CTACCTGGCC ACCCACAACG CGATGGCGAC CAGCGAGGAC
CGCTTCCTCG GCCCGACCCA GGACCCGTCA CTGGTGCACC AGCTCGACCT CGGGGTGCGC
GCCCTGCTGC TCGACGTCCA CCACTGGACG ACGCCCGAGC AGGTGGACGC CGTCCTCGAG
ACGTTGCCGC CCTCGACCCG CACGGCCATC GAGCCGCTGA CCCGCAACGC CCGGTCGGCC
CGGCCGGGGC TGTGGCTGTG CCACAACCTG TGCCAGCTCG GGGCGCTCGA CCTGACCGCG
GAACTCGGCC AGGTCCGGGA CTGGATGGAC CGAAACCCCA CCGAGGTGGT GACGTTGATC
ATTCAGGATC AGGTGCCCGC GCCGGAGATC GCCGGCGCCG TCGCGCAGGC CGGCCTGTCC
CGCATCGTCG CCACCCCGCC GGCCGATGAG GACGGCGAGT GGCCCACGTT GCGGGAGATG
GTCGAGTCCG GCCGGCGCCT CGTCGTCTTC ACCGAGAGCC AGGACATGCC CGGGACATTC
CTGCGCAGTT TCTACCGCTA CGCGTCGGAC ACCCCGTTCT CGGTGGACTC CCCGGAGAAA
CTGACCGGCT GCGCCCGCCT GCGGGGAGCC GCGGGATCGC CGCTGCTCCT GCTCAACAAC
TGGGTGACGG ACGCGGCACC CAGCCGGCAG GCCGCCGTGG TCGCGAACCG TGCCGACCGG
ATCCTCACGC GGTCCAGGCA GTGCGAGACC GAACAGGGCC GGCGCCCCAC CTTCGTCGCG
GTCGATTTTG TCAACATCGG TGACGCGGCC GCCGCGGTCG ACCGGTTGAA CGCCGTCAAC
TGA
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| Protein sequence | MRDSPRRRAG QWGLAVLLAL LWLPFVVLAT SRTTVLSADF YSQALTEANA YDRLYTEVLP
DPAVESLLSG LPVDPTLVTA NLRTVLPPST VEAMTDEQIG RIVDYLRARQ DDIEFSVDLT
PIFGNISGLA NRYIAGEIGT GTSYQVESVT QFTRSVLDAL DDIVAGRPPT ALPTMELSAQ
DTDRVVEAVL GRLKPADRDA VAAPLRADLR SGDVAGALAR VGPLLFEGDE RAVGEMRAHL
TDGAVLNLGV RLSDLRDEPA ISAVSKLHDV SAALDGLSLA LLGLAGLICV AIVALAAARG
RSRMRALAGA VVVAGVAAGV LGVVLRMLLP NPLLALEKPG GPLPPGAGAV LADFSRHAYG
DIESDYLRIV AWTLAVGLAI LGGALLVALS ARWGRAGRRR RLAAGFAVAA PMMIVLTWLA
FPGAAANARE LCNSQVRLCD SRYDEVTYLA THNAMATSED RFLGPTQDPS LVHQLDLGVR
ALLLDVHHWT TPEQVDAVLE TLPPSTRTAI EPLTRNARSA RPGLWLCHNL CQLGALDLTA
ELGQVRDWMD RNPTEVVTLI IQDQVPAPEI AGAVAQAGLS RIVATPPADE DGEWPTLREM
VESGRRLVVF TESQDMPGTF LRSFYRYASD TPFSVDSPEK LTGCARLRGA AGSPLLLLNN
WVTDAAPSRQ AAVVANRADR ILTRSRQCET EQGRRPTFVA VDFVNIGDAA AAVDRLNAVN
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