| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1920 |
|---|
| Symbol | |
|---|
| ID | 5670321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 2301084 |
|---|
| End bp | 2302058 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641240841 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001506263 |
|---|
| Protein GI | 158313755 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4586] ABC-type uncharacterized transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.567782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG TCATCGACGT CCAAGGAGTC AGCAAGACGT TCGTCGTGCG GCGACGCGCG
GGCTGGATGC GCCGGGAGCG GGTAAACGTC CACGCGGTGG CGGACCTGTC GTTCACGGTC
CCGGCCGGGG AGATCGTCGG GTATCTCGGT CCGAACGGAG CCGGCAAGAG CACCACCATC
AAGATGCTGG TGGGCATCCT CACGCCGTCC GGCGGGCGGC TGCGGGTGGC CGGGCTGGAC
CCGTCGCGGC AGCGCCTGCG ACTCAGCCGG CGCATCGGGG TCGTCTTCGG CCAGCGCTCA
CGGCTGTGGT GGGACCTCCC GCTGCGCGAC AGCTTCGAAC TGGTCCGCCG CATGTACCGG
ATTCCAACGC CGCGGTACCG CCACAATCTT GAACATTTCG TCGAGGTGCT GACGCTGGCG
CCGTTCCTCG ACACCCCGGT GCGGCAGCTC TCGCTCGGCC AGCGGATGCG CGGCGACATC
ACTGCCGCCT TCCTGCCCGA CCCGGAGATC GTCTACCTGG ACGAACCGAC GATCGGCCTG
GACGTCGTGT CGAAGGCGGC GGTCCGGTCC TTCCTGGCGC GCACCAACCG CGAGGCGGGG
ACGACGATCG TGCTCACCAC CCACGACATG ACCGACGTCG AGCAGCTGTG CCGGCGGGTG
ATGGTCATCG ACCACGGCCG GCTGGCCTTC GACGGCGAGC TCGAGACGCT GCGCGAGCGC
CTCGGCGGCA CGCGGACGCT GCGGGTCGAC CTCGCCGAGC CGCTGCCGGC GATGACCGTC
GAGGGGGCGC GCGTCGTGCA GGTGCACGGC GCCCGGCAGT GGCTCGAACT CCCGGCGGGT
GGCAGCGCGG CACCGCTGGT CAGCGAGATC GCGGCCCGCT ACCCGCTGGT CGACCTCTCG
GTCGGCGAGC CGGCGATCAA GGACGTCATC GCCCGCCTCT ACACCACCGA CCGACTCGCC
CCCGACGCCC CCTGA
|
|---|
| Protein sequence | MTDVIDVQGV SKTFVVRRRA GWMRRERVNV HAVADLSFTV PAGEIVGYLG PNGAGKSTTI
KMLVGILTPS GGRLRVAGLD PSRQRLRLSR RIGVVFGQRS RLWWDLPLRD SFELVRRMYR
IPTPRYRHNL EHFVEVLTLA PFLDTPVRQL SLGQRMRGDI TAAFLPDPEI VYLDEPTIGL
DVVSKAAVRS FLARTNREAG TTIVLTTHDM TDVEQLCRRV MVIDHGRLAF DGELETLRER
LGGTRTLRVD LAEPLPAMTV EGARVVQVHG ARQWLELPAG GSAAPLVSEI AARYPLVDLS
VGEPAIKDVI ARLYTTDRLA PDAP
|
|---|
| |