| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1856 |
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| Symbol | |
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| ID | 5670258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2228430 |
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| End bp | 2230109 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641240777 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001506200 |
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| Protein GI | 158313692 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0355886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0028209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAACGACT CGCGCACCAC CGGCGGTCCG CTGCCGGAGA CCGCCGGCCC GCTCGCCGCC
GGCGGCCTCC CCGGCGCCCG CGCCGATGCC ACCGTCGCCG ATGTAGCCGT CGCCGGCACC
GCTGTCACCG GCACTACCGT CGCCGGCACT GCCGTCGCCG ACTCCGCTGA TGACGGTGAT
CCCGCCGACC GCCTCGACGT CTCCGTCGTC ATGCCGTGCC TGAACGAGGC CGAGTCGGTC
GGCGTCTGCG TCCGCAAGGC GCTGGCCGGG CTGGCCGCCG CCGGAGTCGC GGGCGAGGTC
GTCGTCGTCG ACAACGGCTC GACCGACGGC TCCGCGGCGG TGGCGACCGC GGCCGGCGCG
CGCGTCGTCG CCGAGTCACG GCGTGGCTAC GGCAACGCCT ATCTCGCCGG CTTCGCCGCC
GCGCACGGCC GGTTCCTGGT CATGGGCGAC TCCGACGACA CCTACGACTT CGCCGACCTC
GGCGCGCTGC TCGCCCCGCT GCGCGCCGGG CGCGCCGACT ACGTGCTGGG TTCCCGGTTC
GCCGGTGAGA TCCTGCCCGG CGCCATGCCC TGGCTGCACC GATACGTCGG CAACCCGCTC
CTCACCGGCA TCCTCAACCG CCTGTTCGAC GTCCGCTCGT CCGACGCCCA CTCCGGGATG
CGGGCCTTCA CCAGGGACGC CTACCGGCGG ATGCGGCTGC GCTGCGAGGG CATGGAGCTC
GCCTCCGAGC TCGTCATCGC CGCCCGTCGA GCCGAGCTGC GGATCGAGGA GGTGCCGATC
ACCTACCACC CGCGGGTCGG GGCGTCGAAG CTCCACTCAC TGCGGGACGG CTGGCGCCAC
CTGCGGTTCA TGCTGCTGCT GGCGCCCAGG CACCTGTTCG TCCTGCCGGG TCTGGTCCTG
TTCGGGCTGG GCACGGCCGG CCAGCTGGCG CTCCTGCCCG GTTCGCTCGA TGTCGGGTTC
CACCGGCTCG ACCTGCACTT CTCCGTGCTG TTCGCACTGA TCGCGATCCT CGGTTGGCAG
TTGGTGCTTC TCGGTGTCTT CGCCGACGTC CACAACCATG CCGCGGGGTG GCAGGAGCGC
CGCCGCTGGC CGCTGACGTC GATCCACCGG CGTTTCACGC TCGAGCGGGG CCTGGCGGCC
GGCGGGATCC TGTTCACCGT CGGCTTCGCG ATCGACTGCG TCATACTCGC CCGATGGCTG
GCGAACTCGA TGGGGCCGCT CAACGAGCTG CGCCCCGCCC TGCTCGCCAT GTCGCTGATG
GTGCTCGGCG CGCAGACCGC CTTCGGGTCG TTCTTCCTGC GGCTGGTGAC GGCCGGGCCG
AGCGGCGGCC ACCGCCGGGC CGGCTGGGCG CCCGCGACCG GACTCGCCGT CTCAGCCGCG
GCCACCGGCG CGTCGCCATC CGCAGTCTCG CCGTCCTCAG TGTCGCCGGC CGATCCCCCG
CCGGCCGCGG CCCCGCCGGC CGCGAGGCCG GTGGCGGCCG AGCCGGGCGA CGACGCGGCG
GCTGGTGACC GCGCCCCCGG GCCGGTCGGG GCGCCGGGCC CGGTCGGGAC GCCGACGCCA
GACGGCGGAG CCGGTCCGGC TACCCGCACG GGCCCGGAAA GTCATGAGAA CGACGAGGAT
GCGGCGTTCC TCGCCGCGCC CGCACCCGTC CTCGGTGGAA TTCCCGCCCA CCAGCGCTGA
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| Protein sequence | MNDSRTTGGP LPETAGPLAA GGLPGARADA TVADVAVAGT AVTGTTVAGT AVADSADDGD
PADRLDVSVV MPCLNEAESV GVCVRKALAG LAAAGVAGEV VVVDNGSTDG SAAVATAAGA
RVVAESRRGY GNAYLAGFAA AHGRFLVMGD SDDTYDFADL GALLAPLRAG RADYVLGSRF
AGEILPGAMP WLHRYVGNPL LTGILNRLFD VRSSDAHSGM RAFTRDAYRR MRLRCEGMEL
ASELVIAARR AELRIEEVPI TYHPRVGASK LHSLRDGWRH LRFMLLLAPR HLFVLPGLVL
FGLGTAGQLA LLPGSLDVGF HRLDLHFSVL FALIAILGWQ LVLLGVFADV HNHAAGWQER
RRWPLTSIHR RFTLERGLAA GGILFTVGFA IDCVILARWL ANSMGPLNEL RPALLAMSLM
VLGAQTAFGS FFLRLVTAGP SGGHRRAGWA PATGLAVSAA ATGASPSAVS PSSVSPADPP
PAAAPPAARP VAAEPGDDAA AGDRAPGPVG APGPVGTPTP DGGAGPATRT GPESHENDED
AAFLAAPAPV LGGIPAHQR
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