Gene Franean1_1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1841 
Symbol 
ID5670243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2210874 
End bp2211161 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content76% 
IMG OID641240762 
Productthiamine biosynthesis protein ThiS 
Protein accessionYP_001506185 
Protein GI158313677 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.430269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATC GTCCGAACCG GGCGGAGCTC GATCCGTCCC CGGGAGCAGC AGCCGTCAGC 
ACCGCCCCGG CCGGTGGCCC GGGCGGCGCG CGGATCGTCG TCAACGGGCA GCCGCGGGAG
GTGCCCGCCG GGCTCGCCCT GCCGGACCTG CTCGTCCAGC TCGGGCTGCG GCCCGGCTCG
GTGGTCGTGG AACTGCGCGG CACCGCGCTC ACCCCGTCGG AGATGCCTTC GGTCCACCTG
GCCGACGGCG ACACCCTGGA GATCGTCCGT GCCGTCGCCG GGGGCTGA
 
Protein sequence
MADRPNRAEL DPSPGAAAVS TAPAGGPGGA RIVVNGQPRE VPAGLALPDL LVQLGLRPGS 
VVVELRGTAL TPSEMPSVHL ADGDTLEIVR AVAGG