| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1820 |
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| Symbol | |
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| ID | 5670222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2184314 |
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| End bp | 2186128 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641240741 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001506164 |
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| Protein GI | 158313656 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.591607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGAGT ACACCTCTCC CGCCCGAGTC ACCGTGGCGG ATGACATGAC TCTCAGCGAT
GCCGTATTCG CCAACGCGTC ACGGACACCC GAGAAGGTCA TCGTCCGCCA CAAGTCGGGT
GGCCAGTTCG TTGACGTGAC CGCGCAGGAG TTCCGCGATC TGGTGGTCCG CACGGCCGCC
GGCCTCGCCG CCCGCGGGGT GCACCCCGGC GACCGCGTCG CGATCATGAG CCGCACTCGG
TACGAATGGA CGGTCGTCGA CTACGCGGTC TGGGTAGCCG GCGCGGTCAC CGTGCCGATC
TACGAGACGT CCAGCGCCAG CCAGCTCGAG TGGATCCTGT CGGACTCGGA GGCCGTTCTC
ACCGTCGTCG AGTCCGAGGC CAACGCCGCA CTCGTCGCCA CGGTGCGCGA CCAGGTTCCC
ACCCTGCGCG AGGTGCTCGC CCTGGACGGC GGCGCGCTCG ACACCCTGGC CGAGGCCGGG
GCCGCCGCGG GGACCGGCGA GGAGGAGCTC GCCGCCGCGC GGGCCGGGGT GACCGCGGCC
AGCATCGCCA CGATCATCTA CACCTCCGGC ACCACCGGCA GACCGAAGGG CTGCGAGCTC
GCCCACCGCT CGCTGCTGTT CAACGCGATG AGCTCCGCGG CGACCATGCC GGACCTGTTC
ACCGAGGACG CGTCCACGCT GATGATCCTG CCGCTGGCCC ATGTGCTGGC GCGGACGATG
CAGTGCACCA TCATCAACAG CGCGCGGTGC ATCGCCTACG CGCCGGACAC ATCCACGCTG
CTGGCCGACC TGGCCCAGGT CCGCCCGAGC TTTCTGCTCG CGGTGCCGAG GGTCTACGAG
AAGGTGCACG CCGGCGCCCG CGCCAAGGCC CACGCCGACG GGAAAGGCCG GATCTTCGAC
GCCGCCGAGG CCACCGCGAT CGCCTACAGC GAGGCCCTCG ACCACGGCGG GCCCGGCTTC
CTGCTGCGCG CTCGGCACGC GTTGTTCGAC CGCCTCGTCT ACAGCAAGCT GCGTGCCGCG
ATGGGCGGCC GGATCGACCA CGCCATCAGC GGCGGTGCGC CGCTGGGCCC ACGCCTCTGC
CACTTCTACC GGGGCATCGG CGTTCCGATC TTCGAGGGGT ACGGGCTCAC CGAGTCCACC
GCGGCCGCGA CCGTGAACCG GCCCGATTCG CTGAAGATCG GCACCGTCGG CCTGCCGCTG
CCCGGCGTGA CGATCCGCAT CGCCGACGAC GGGGAGATCC TCATCCGCGG CGACCTGGTC
CTGAGCGGCT ACCGCAACGA CGAGACGGCG GCCAAGGAGG CGCTCGACGC CGACGGCTTC
CTGCGGTCCG GTGACCTGGG CTCCCTCGAC GAGACCGGAC ATCTGCGCAT CACCGGGCGG
AAGAAGGAGC TGCTCGTCAC CGCGGGCGGC AAGAACATCG CCCCGGCGCC CCTCGAGCAC
CGCATCCAGG AGAACCCGCT GATCAGCCAG GCGATGCTGA TCGGCGACCA GCGGCCGTTC
ATCGCCGCCC TGATCACCCT CGACCCGGAC GCCTTCGCCT CCTGGCGCGA CACCCACGGC
CACCCGTCGA CGGTGACACC CGCCGACCTC GCCACCGACC CGGAACTGCT GGCCGAGGTC
CAGAAGGCCG TGGACGCGGC GAACGCCACC GTCTCCCACG CCGAGTCGAT CAAGAAGTTC
GTGATCCTGC CGAACGACTT CACCGTCGCC GGCGGCGAGC TCACCCCGAG TCTCAAGGTG
AAGCGCAACC TCATCTTGGA ACGCCACGCG GCAGTCGTGG AGTCCATCTA CGCGGGGGCC
CGGACCGCCT CCTGA
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| Protein sequence | MREYTSPARV TVADDMTLSD AVFANASRTP EKVIVRHKSG GQFVDVTAQE FRDLVVRTAA
GLAARGVHPG DRVAIMSRTR YEWTVVDYAV WVAGAVTVPI YETSSASQLE WILSDSEAVL
TVVESEANAA LVATVRDQVP TLREVLALDG GALDTLAEAG AAAGTGEEEL AAARAGVTAA
SIATIIYTSG TTGRPKGCEL AHRSLLFNAM SSAATMPDLF TEDASTLMIL PLAHVLARTM
QCTIINSARC IAYAPDTSTL LADLAQVRPS FLLAVPRVYE KVHAGARAKA HADGKGRIFD
AAEATAIAYS EALDHGGPGF LLRARHALFD RLVYSKLRAA MGGRIDHAIS GGAPLGPRLC
HFYRGIGVPI FEGYGLTEST AAATVNRPDS LKIGTVGLPL PGVTIRIADD GEILIRGDLV
LSGYRNDETA AKEALDADGF LRSGDLGSLD ETGHLRITGR KKELLVTAGG KNIAPAPLEH
RIQENPLISQ AMLIGDQRPF IAALITLDPD AFASWRDTHG HPSTVTPADL ATDPELLAEV
QKAVDAANAT VSHAESIKKF VILPNDFTVA GGELTPSLKV KRNLILERHA AVVESIYAGA
RTAS
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