Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1762 |
Symbol | panB |
ID | 5670164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2112232 |
End bp | 2113173 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641240683 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_001506106 |
Protein GI | 158313598 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.486071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00301394 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTTCAT CGATCGGCAA GCCCCGCTCA TCCAGCGGCC CCGCCACGCC CGGAACGGAG CCGGCGGCGA CGCTCTACGG CGCGCCGACC ACGCCCCGAA CCGGTGGCCA GGCGCCCGCC ACACCGACCA CCATCCGGCC CGCCAGCCAC AGCCGGACCA CAGTCCGCGA CATCCGCGCA GCCAAGGACC GCGGCCAGCG GTGGGCCATG CTCACCGCCT ACGACGTGAT CACCGCCGGG ATCTTCGACG AGGCCGGCAT CCCGGTCCTC CTCGTCGGGG ACTCCGCGGC AAACACCGTC TACGGCTACG AGACCACCGT CCCGATCACC GTGGACGAGC TGGTCCCGCT GGTCCGCGCG GTGGTGCGCG GCGCGCCACA CGCGATGGTC GTCGCCGACC TGCCGTTCGG CTCCTACCAG GCGAGCCCCG AGCAGGCGCT GACGACCGCG ACCCGCTTCC TCAAGGAGGG CGGGGCGCAC GCGGTCAAGC TCGAGGGCGG CGCGCGGGTG CTGCCCCAGG TCGGGGCGCT GGTGGCCGCC GGCATCCCGG TGATGGGCCA CCTCGGCCTG ACCCCGCAGA GCGTCCACGC CTTCGGCGGC TACCGGGTAC AGGGCCGCGA CGGCGCCGGT GAGGTCCTGC TCGCCGACGC ACTGGGCCTG CAGGAGGCGG GCGCGTTCGC CGTCGTGCTG GAGGTCGTCC CCGCCGACCT GGCCGCCCGG GTGACCAAGG AGCTGCTGAT CTCCACGGTG GGGATCGGCG CCGGCGCCGA CTGCGACGCG CAGGTCCTCG TCTGGCAGGA CATGGCCGGC CTGACCGGCG GCCAGGCGCC CCGCTTCGTC AAGCGGTTCG CCGACCTGCG CACGGCGCTC ACCGACGCCG CGGCCGCGTT CCGTGACGAG GTGTCGGGCG GCCTCTACCC GACTGTCGAG CACAGCTACT GA
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Protein sequence | MTSSIGKPRS SSGPATPGTE PAATLYGAPT TPRTGGQAPA TPTTIRPASH SRTTVRDIRA AKDRGQRWAM LTAYDVITAG IFDEAGIPVL LVGDSAANTV YGYETTVPIT VDELVPLVRA VVRGAPHAMV VADLPFGSYQ ASPEQALTTA TRFLKEGGAH AVKLEGGARV LPQVGALVAA GIPVMGHLGL TPQSVHAFGG YRVQGRDGAG EVLLADALGL QEAGAFAVVL EVVPADLAAR VTKELLISTV GIGAGADCDA QVLVWQDMAG LTGGQAPRFV KRFADLRTAL TDAAAAFRDE VSGGLYPTVE HSY
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