Gene Franean1_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1743 
Symbol 
ID5670145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2082694 
End bp2083896 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content71% 
IMG OID641240661 
Productargininosuccinate synthase 
Protein accessionYP_001506087 
Protein GI158313579 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00227596 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCGAAC GCGTCGTGCT TGCCTACTCG GGCGGCCTCG ACACGTCCGT GGCCATCGGC 
TGGATCGGTG CCGAGACCGG CGCCGAGGTC ATCGCCCTGG CCGTCGACGT GGGCCAGGGC
GGCGAGGACC TCGAGGCGAT CCGCCAGCGC GCCTTCACCT GCGGCGCCGT CGAGTCGATC
GTCGTCGACG CCCGCGAGGA GTTCGCGGCA TCCTTCGTCG CCCCGGCGAT CCGCGCCAAC
GCCCTGTACA TGGACCGCTA CCCGCTCATC TCCTCGCTGT CCCGGCCGAT CATCGTGAAG
CACCTGGTCG AGGCCGCCAA ACAGCACGGG GCGGACGCGA TCTCGCACGG CTGCACGGGC
AAGGGCAACG ACCAGGTCCG CTTCGAGGTC GGCGTGATGG CACTGGCCCC GGGCCTGCGC
GTGCTGGCCC CGGTGCGCGA CTCGGGCATG ACCCGGGACA AGGCGATCGC CTTCGCCGAG
GAGCGTGGCC TGCCGATCGA CGTCTCGAAG AAGTCCCCGT ACTCGATCGA CCAGAACCTG
TGGGGCCGCA CGGCCGAGTG CGGGGTCCTC GAGGACCCGT GGGCGCAGCC GCCGGAGGAC
GTCTTCGTCT ACACGGCCGA CCCGACGGTC TCCCGGCCGT CCGACGAGGT CACGATCTCG
TTCACCGACG GCCTGCCGAC CGGGCTGGAC GGGCGGGCAC TGTCGCTGGT GGACCTCGTC
GCCGAGCTCA ACACCCGGGC GGGTGCCCAG GGCGTCGGTC GCATCGACAT GATCGAGGAC
CGGCTCGTCG GCATCAAGAG CCGGGAGATC TACGAGTGCC CAGCGGCGAT CACGCTGCTG
ACCGCGCACC GTGACCTGGA GGACCTCACC CTCGAGCGGG ACGTCGCCCG GTTCAAGCGG
GGCATCGACC AGCGCTGGGG CGAAATCGTC TATGACGGGC TGTGGTTCTC GCCGTTGCGG
GCAGCCCTCG ACGCCTTCGT GGACTCGGCC AGTGTCGGTG TCACCGGCGA CGTCCGGATC
CGGCTGGCGG GCGGCGTCGC CCAGGTCGTG GGCCGTCGCA GCCCGGGCAG TCTCTACGAC
CACGCGCTGG CCACCTACGA TGCCGGCGAC CAGTTCGACC AGACCGACGC GCGGGGATTC
ATCGAGCTGT GGGGCCTGCC CACCAAGGTC TGGGCGGCCC GCGAACAGCG GCTCAACCCG
TGA
 
Protein sequence
MTERVVLAYS GGLDTSVAIG WIGAETGAEV IALAVDVGQG GEDLEAIRQR AFTCGAVESI 
VVDAREEFAA SFVAPAIRAN ALYMDRYPLI SSLSRPIIVK HLVEAAKQHG ADAISHGCTG
KGNDQVRFEV GVMALAPGLR VLAPVRDSGM TRDKAIAFAE ERGLPIDVSK KSPYSIDQNL
WGRTAECGVL EDPWAQPPED VFVYTADPTV SRPSDEVTIS FTDGLPTGLD GRALSLVDLV
AELNTRAGAQ GVGRIDMIED RLVGIKSREI YECPAAITLL TAHRDLEDLT LERDVARFKR
GIDQRWGEIV YDGLWFSPLR AALDAFVDSA SVGVTGDVRI RLAGGVAQVV GRRSPGSLYD
HALATYDAGD QFDQTDARGF IELWGLPTKV WAAREQRLNP