Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1728 |
Symbol | |
ID | 5670130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2066263 |
End bp | 2066712 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641240646 |
Product | initiation factor 3 |
Protein accession | YP_001506072 |
Protein GI | 158313564 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00351932 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00163995 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCCTGG CGCAGGAGTC CGACCTCGAC CTCGTCGAGG TGGCACCCAC TGCCCGTCCG CCGGTCTGCA AGCTGATGGA CTATGGAAAG TTCAAGTACG AGTCCGACCA GAAGCGTCGC GAGGCTCGTA AGAACCAGGT CCAGACGGTT ATCAAGGAGA TGAAGCTCCG ACCGAAGATC GATCCGCACG ACTACGAGAC CAAGAAGGGT CACGTAGTGC GGTTCCTCAA GGCCGGCGAC AAGGTCAAGA TCACCATCAT GTTCCGAGGT CGGGAGCAGT CCCGTCCCGA GCTCGGCATC CGGCTGCTGC AGCGGCTGTC GACCGACGTG GCCGACCTTG GCTACGTCGA GGCCCAGCCC AAGCAGGACG GCCGGAACAT GACGATGGTC ATGGCCCCGC ACAAGGGCGC CAAGCCCCAG CGGACCCCGG AGTCCGCCAG CCAGGTGTAG
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Protein sequence | MRLAQESDLD LVEVAPTARP PVCKLMDYGK FKYESDQKRR EARKNQVQTV IKEMKLRPKI DPHDYETKKG HVVRFLKAGD KVKITIMFRG REQSRPELGI RLLQRLSTDV ADLGYVEAQP KQDGRNMTMV MAPHKGAKPQ RTPESASQV
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