Gene Franean1_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1728 
Symbol 
ID5670130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2066263 
End bp2066712 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content64% 
IMG OID641240646 
Productinitiation factor 3 
Protein accessionYP_001506072 
Protein GI158313564 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00351932 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00163995 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCCTGG CGCAGGAGTC CGACCTCGAC CTCGTCGAGG TGGCACCCAC TGCCCGTCCG 
CCGGTCTGCA AGCTGATGGA CTATGGAAAG TTCAAGTACG AGTCCGACCA GAAGCGTCGC
GAGGCTCGTA AGAACCAGGT CCAGACGGTT ATCAAGGAGA TGAAGCTCCG ACCGAAGATC
GATCCGCACG ACTACGAGAC CAAGAAGGGT CACGTAGTGC GGTTCCTCAA GGCCGGCGAC
AAGGTCAAGA TCACCATCAT GTTCCGAGGT CGGGAGCAGT CCCGTCCCGA GCTCGGCATC
CGGCTGCTGC AGCGGCTGTC GACCGACGTG GCCGACCTTG GCTACGTCGA GGCCCAGCCC
AAGCAGGACG GCCGGAACAT GACGATGGTC ATGGCCCCGC ACAAGGGCGC CAAGCCCCAG
CGGACCCCGG AGTCCGCCAG CCAGGTGTAG
 
Protein sequence
MRLAQESDLD LVEVAPTARP PVCKLMDYGK FKYESDQKRR EARKNQVQTV IKEMKLRPKI 
DPHDYETKKG HVVRFLKAGD KVKITIMFRG REQSRPELGI RLLQRLSTDV ADLGYVEAQP
KQDGRNMTMV MAPHKGAKPQ RTPESASQV