| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1718 |
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| Symbol | |
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| ID | 5670120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2054801 |
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| End bp | 2055352 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641240636 |
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| Product | peptide deformylase |
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| Protein accession | YP_001506062 |
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| Protein GI | 158313554 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0107997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00219347 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCCGTCC GTGATATCCG CCTTCTCGGG GATCCGGTGC TGCGTACGGT CGCCGACCCG
GTGGCGACCT TCGACCGGGA GCTGCGCCGC CTCGTCGACG ATCTCGCTGA CACCATGCGC
GACGCCGGCG GCGTCGGCCT CGCCGCGCCG CAGTTGGGGG TGTCGCTGCG TATCTTCACG
TACCTCGATG ACTCGGACGA GGTCGGGCAC CTGATCAACC CGGTCCTGGG GCCCTTCAGC
GAGGAGATGA TGGACGGCGA GGAGGGCTGC CTGTCGTTGC CGGGGCTGGC ATTCGACCTG
CGCCGTCCGG AACGCGTCCT CGCCGTCGGC CAGAACTCCC ACGGTGACCC GGTCACGGTC
GAGGGCAGTG GCATCCTGTC CCGATGCCTG CAACACGAGA CCGATCACCT CGACGGGATC
CTGTTCATCG ACCGTCTCGA CAAGGAGACG AAGCGGGCGG CCATGAAGGC GATCCGCGAG
GCGGAGTGGT CGAACGAGCC GAAGCCCGCG GTCAAGGTAT CGCCGCACCC ATTGTTCGGC
CGCGGGCGCT GA
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| Protein sequence | MSVRDIRLLG DPVLRTVADP VATFDRELRR LVDDLADTMR DAGGVGLAAP QLGVSLRIFT
YLDDSDEVGH LINPVLGPFS EEMMDGEEGC LSLPGLAFDL RRPERVLAVG QNSHGDPVTV
EGSGILSRCL QHETDHLDGI LFIDRLDKET KRAAMKAIRE AEWSNEPKPA VKVSPHPLFG
RGR
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