Gene Franean1_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1716 
Symbol 
ID5670118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2050678 
End bp2051874 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content70% 
IMG OID641240634 
ProductS-adenosylmethionine synthetase 
Protein accessionYP_001506060 
Protein GI158313552 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0192] S-adenosylmethionine synthetase 
TIGRFAM ID[TIGR01034] S-adenosylmethionine synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.123594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00797673 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCGACGC GCCTTTTCAC GTCCGAGTCC GTCACGGAAG GACACCCGGA CAAGATCGCT 
GACCAGGTCA GCGACTCCAT TCTCGATGCC ATGCTCAAGG ACGACCCGAA GAGCCGGGTC
GCCGTCGAGA CCATGATCAC CACCGGTCAG GTGCACGTGG CCGGCGAGGT GACCACCAAG
ACCTACGTCG ACATCGCCTC GGTGGTCCGC GAGCGGATCC TGGAGATCGG TTACGACTCC
TCCAAGAAGG GCTTCGACGG CGCCTCCTGC GGCGTGAGCG TCTCGATCGG CTCGCAGTCG
CCCGACATCG CCCAGGGTGT CGACACCGCC CACGAGGCGC GCGTCGAGGG CTCCACCGAG
GACGACCTCG ACCGTCAGGG CGCCGGCGAC CAGGGCCTGA TGTTCGGGTT CGCCTGCGAC
GAGACCCCCG AGCTCATGCC GCTGCCGATC GCCCTGGCAC ACCGGCTCGC CCGGCGGCTG
TCCGCCGTCC GCAAGGACGG CCAGGTCGGC TACCTGCGCC CCGACGGCAA GACGCAGGTC
ACCATCGAGT ACGAGGACGG CAAGCCGGTC CGCCTGGACA CCGTTGTGGT CTCCTCGCAG
CACGCGGCCG ACATCGACCT CGACACCCTG CTCGCGCCCG ACGTCGCCGA GTACGTCGTG
GAGCCGGAGC TCGCCCTCCT CGAGATCAGC ACCGAGGGGC GCCGCCTGCT GGTGAACCCG
ACCGGTCGCT TCGAGATCGG TGGCCCGATG GGCGACGCCG GCCTCACCGG GCGCAAGATC
ATCGTGGACA CCTACGGCGG GTACGCCCGG CACGGCGGCG GCGCCTTCTC GGGTAAGGAC
CCGTCCAAGG TCGACCGCTC GGCTGCCTAC GCCATGCGCT GGGTCGCCAA GAACGTCGTG
GCCGCGGGCC TGGCCAGCCG CTGTGAGGTC CAGGTCGCCT ACGCGATCGG CAAGGCCCAC
CCGGTCGGCC TGTTCGTCGA GACCTTCGGC ACGGGCAAGG TGCCGGACGC GCAGATCCAG
GACGCCGTCA CGCAGGTCTT CGACCTCCGC CCGGCCGCGA TCGTGCGGGA CCTCGACCTG
CTGCGCCCGA TCTACGCGCA GACGGCCGCC TACGGGCACT TCGGCCGCCC GGAGCTGGAC
TTCACCTGGG AGGCGACCTC CCGCGCCGAC GCCCTAACAG CCGCCGTCAA GGGCTGA
 
Protein sequence
MATRLFTSES VTEGHPDKIA DQVSDSILDA MLKDDPKSRV AVETMITTGQ VHVAGEVTTK 
TYVDIASVVR ERILEIGYDS SKKGFDGASC GVSVSIGSQS PDIAQGVDTA HEARVEGSTE
DDLDRQGAGD QGLMFGFACD ETPELMPLPI ALAHRLARRL SAVRKDGQVG YLRPDGKTQV
TIEYEDGKPV RLDTVVVSSQ HAADIDLDTL LAPDVAEYVV EPELALLEIS TEGRRLLVNP
TGRFEIGGPM GDAGLTGRKI IVDTYGGYAR HGGGAFSGKD PSKVDRSAAY AMRWVAKNVV
AAGLASRCEV QVAYAIGKAH PVGLFVETFG TGKVPDAQIQ DAVTQVFDLR PAAIVRDLDL
LRPIYAQTAA YGHFGRPELD FTWEATSRAD ALTAAVKG