| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1686 |
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| Symbol | |
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| ID | 5670088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2017736 |
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| End bp | 2018581 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641240604 |
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| Product | regulatory protein GntR HTH |
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| Protein accession | YP_001506030 |
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| Protein GI | 158313522 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00156623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.250936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTAG CCGAGCACCA GCGTGGTGGC AGGCCGGCAA AAGGCCCGAG CGGCCGTGCC
GCGGCCGCTG GTGGCCCGCT CGGCGGTGGT CTCGGTCAGC AGGTCCGCGT GCCCAAGACC
GCCGAGCTCG TCGCGGCCCA GCTCCGCCGC CAGATCGTCC GTGGTGAGCT CGTCGAAGGC
GACGCCCTAC CCCCCGAAGC CGTCCTCATG GAACAGTTCG GCGTCTCCCG CCCCACCCTG
CGCGAAGCCT TCCGCGTCCT CGAATCCGAA GCCCTCATCT CCGTCCGCCG CGGCGCCCAC
GGCGGCGCCC GCGTCCACAC CCCCGACGGC CAGGTCGCCG CCCGCTACGC CGGCCTCGTC
CTCGAACACC GCCACACCAC CCTCGCCGAC GTCCACACCG CCCACACCCT GCTCGAACCC
GCCGCCGTCC GACTCCTCGC CACCCACCAC ACCGACACCA CCCTCACCAC CCTCCACACC
GCCCTCACCC ACCCCGACCC CACCCACTTC CACCACCAAC TCCTCGAACA CGCCGGCAAC
CAGACCCTCA CCATGATCGC CGGCATGCTC CGCCACATCC TCGACACCCA CACCACCACC
CCCCACCCCA CCCACACCAC CCCCCACAAC CACCACGACC ACACCCACCT CCTCGACCTC
ATCGCCCGCC ACGACACCGA CGCCGCCGAA GCCCACTGGC GCACCCACAT CGCCACCACA
CCCAGCCAGC CACCCAGCAC CGTCATCGAC CTGCTCGGCA CACCGCCCGC CGCCCCGGGC
CGCGGCCTCG AGGGCACCCG ACCAGTGCCG ATGCCGATGC CAATGCCCCG GAACTCCTCG
GGCTGA
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| Protein sequence | MTLAEHQRGG RPAKGPSGRA AAAGGPLGGG LGQQVRVPKT AELVAAQLRR QIVRGELVEG
DALPPEAVLM EQFGVSRPTL REAFRVLESE ALISVRRGAH GGARVHTPDG QVAARYAGLV
LEHRHTTLAD VHTAHTLLEP AAVRLLATHH TDTTLTTLHT ALTHPDPTHF HHQLLEHAGN
QTLTMIAGML RHILDTHTTT PHPTHTTPHN HHDHTHLLDL IARHDTDAAE AHWRTHIATT
PSQPPSTVID LLGTPPAAPG RGLEGTRPVP MPMPMPRNSS G
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