| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1636 |
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| Symbol | |
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| ID | 5670038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1952713 |
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| End bp | 1953393 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641240554 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001505980 |
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| Protein GI | 158313472 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.232227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAGGCA ACGAAGGCGG GCCCCCGCGA GCGCGGCGCG GCCTTCCCGC CAAACGCGAG
GCGATCATGG CGGCGGCACT CGATCTCTTC GTCCGCCAGG GATACGCGGC CACGACACTC
GACGACATCG CCACCGCGAC GCCGGTCTCG AGGCAGACCG TCTACAACCA CTTCGGCGAC
AAGGAGACGC TGTTCCGTGC GGTCATCGAC ACGCACCTGA ACGCGACCCT CGAGGCGTTG
CACGCCCCAG CCGACCGGCC GACCACCGGC CCGGCCGAAC GCCCGGTGGA CGCCGAGTCG
CAGCTGAACG ATCTCGCGAG ACGCCTGACA GCGATCTTCC TCAATCCCCG GACGGCGTCA
CTGCGGCGAC TCCTCCAGTC GGAGGGCCCT CGCCAACCAC ATCTGCTCGA GCTGTGGCGC
ACCCGCGTCG CCGGCCCCGT CTGGTCGGAG GTGATCAGCC AGCTGACCCG GCTCACGCAC
GCCGGCGCGC TGCGCATCGA CGATCCCGTC AGGGCCGCGA GCCAGTTCAT CGTCCTGGTC
ACCGGCACGG CCTGGCAGAT CACCGAGGTG GGTGTCTTCC TCTACCCGCC CCCGCCGGGC
GTGGACGGCG AGCAGTTGGA CACCGCGGTC CGCTCCTGCG TCGCGCTGTT CGTCCGCGGC
TACCGGCAGA CGACCCATTG A
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| Protein sequence | MPGNEGGPPR ARRGLPAKRE AIMAAALDLF VRQGYAATTL DDIATATPVS RQTVYNHFGD
KETLFRAVID THLNATLEAL HAPADRPTTG PAERPVDAES QLNDLARRLT AIFLNPRTAS
LRRLLQSEGP RQPHLLELWR TRVAGPVWSE VISQLTRLTH AGALRIDDPV RAASQFIVLV
TGTAWQITEV GVFLYPPPPG VDGEQLDTAV RSCVALFVRG YRQTTH
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