| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1611 |
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| Symbol | |
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| ID | 5670014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1928250 |
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| End bp | 1929587 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641240530 |
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| Product | hypothetical protein |
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| Protein accession | YP_001505956 |
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| Protein GI | 158313448 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4102] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00173364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTCA GCCGCCGCCG CTTCCTCATC GCCTCCGGCG TCACCGGAGC CGGGGCCCTC
GCCGCGGGCG CGGGGGTGCT CAGCTGGGAC GCCCTGCACG GCGCCGCCGC CGACCGCCCG
CTGGCCGCGG GCACCGGCGT GCTGGTCGTC GTCACCCTCT ACGGCGGCAA CGACGGCCTG
AACACCGTCA TCCCCTTCCA GGACCCGGCC TACCGGCAGG CACGCGGCGA CCTCGCGCCT
GCCGAGCCGG ACGTCCACCC GCTGGCCGAC GGCCTCGCGC TCGCCCCGGC GCTCCCCGGG
CTCGCCGGGC TGTGGAAGGA GGGCCGCCTC GCGGTCGTGC GGGGCGTCGG CTACCCGGAG
CCGGATCACA GCCACTTCCG GTCGATGGCC ATCTGGCAGA CGGCGTCACC GCGGACGGCG
TCGACGTCCG GCTGGATCGG GCGCTGGCTC GACGCGCTGG CTGCCAAGAA CGGCGCGACA
GGCGGCGCGA CGGGCGGTCC GGCAGGCGGT TCGACGGCCA GCCCGGCGGG TGGGCAGGCC
GGCGGCGCCG ATCCGCTGCG GGCGCTGGCG ATCGGCCCCA CGCTGCCGCC GCTGCTGGTC
GGCGACCACA CGGTGGGCTC GGCGGTACCC ACCGGCGGCT TCGCCGCGCC CAGCGGTCGG
CTGGGAGCCG ACCTGCACGC GCTCTACCGC CCCGACCCGG CCGACAGCCC GCTGGCCGCC
CGGGCCGCCG CATCCGGCGC GGACCTGTTC ACCGTCGCCG GGGCGCTCGC CCCGGTGCTC
GCCGACGCCC CGGAACGCGA CGCCGGCACC CAGGGCCAGC TCGACGGCGG GGATCCTGGG
GCAGGCGGTG GCGATGGCGG CGAGCTCGGC GCCCAGCTCG ACGTGGTCGC CCGCGCCATA
ACCGCCGGGG TGCCCACCCG GGTGTACTCG GTGAGCCTGG GCGGCTTCGA CACCCATGCC
GCTGAAGACG GCACCCACAC CCGCCTGCTC GGCCAGCTGG ATGCCGCGCT GACCCGCTTC
CACCGCTCCA TGGCCGCCAC GCCCCGCGGG AGCGGGGTGA CGACGATGGT CTACTCGGAG
TTCGGCCGGC GGGTCGCCGC GAACGCCAGC GGCGGCACCG ACCACGGCAC CGCCGGTCCC
GTCCTGCTCC TGGGGCGGCC GGTGCGCGGC GGCTTCTTCG GCGACCAGCC CCCCCTCACC
GACCTCGACG ACGGCGACCT GCGGGTCACC ACGGACTTCC GCTCGGTGTA CGCGACGCTG
CTGGAGCGCG TCCTGGGAAC GGAGGCGGGC ACCGTGCTCG GGTCCGACGA GAGCTTCCCC
CGCCTCGCGT TTCTCTGA
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| Protein sequence | MPLSRRRFLI ASGVTGAGAL AAGAGVLSWD ALHGAAADRP LAAGTGVLVV VTLYGGNDGL
NTVIPFQDPA YRQARGDLAP AEPDVHPLAD GLALAPALPG LAGLWKEGRL AVVRGVGYPE
PDHSHFRSMA IWQTASPRTA STSGWIGRWL DALAAKNGAT GGATGGPAGG STASPAGGQA
GGADPLRALA IGPTLPPLLV GDHTVGSAVP TGGFAAPSGR LGADLHALYR PDPADSPLAA
RAAASGADLF TVAGALAPVL ADAPERDAGT QGQLDGGDPG AGGGDGGELG AQLDVVARAI
TAGVPTRVYS VSLGGFDTHA AEDGTHTRLL GQLDAALTRF HRSMAATPRG SGVTTMVYSE
FGRRVAANAS GGTDHGTAGP VLLLGRPVRG GFFGDQPPLT DLDDGDLRVT TDFRSVYATL
LERVLGTEAG TVLGSDESFP RLAFL
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