| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1609 |
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| Symbol | |
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| ID | 5670012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1925935 |
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| End bp | 1926696 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641240528 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001505954 |
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| Protein GI | 158313446 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000418477 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGAC TACAAGGAAA GATCATTCTG GTGGCGGGCG CGGCCACCGG GCTCGGGGCC
GACTCGGCCG GACGGCTGGC CCGGGAGGGC GCCAAGGTCG TCGTCGGCGA CCTGGACCTC
ACCGGCGCGG AACGGACGGC GGCGGCCATC CGGGAGGCCG GCGGCGACGC GGTCGCGGCG
GGCTTCGACA TCTCCGACGA CGCCTCCGTC GCGGAGCTCG TCGCCCTCAC CGTGCGCACC
CACGGCGGCC TGGACGCCGT GCACGTCAAC GCCGGTGACA TGGGCGCCGT CCAGAAGGAC
AGCAACGTCG TCGACATCGA CCTCGCGATC TGGGACCGCA CGGTCGCCGT GAACCTTCGC
GGTCACATGC TCGTCAGCCG GCACGCCATC CCGCGGCTGC TGGAGCGGGG CGGCGGCGCG
ATCGTCTACA CGTCGTCCAT CGCGTCGTTC ACCGGCGAGC CGCAACGGCC CGCCTACGCG
GTGACCAAGG CGGGCATCAA CGCGCTCGCC CGGCATGTCG CCTCCCGGTG GGGCACCGAG
GGGATCCGCG CCAACGCGGT CACGCCCGGC CTGATCCTCA CCCGCGAGAT CCGGGACGGC
GCGCCGCCGG ACATGCTGTC CGCGATGCTG GCCCGCACCC GCAGCACCCG GCACGGCGAG
GCGCGGGACG TCTCGAGCAT GGTCGCCTAC CTGCTCTCGG ACGAAGGATC CTGGATCAAC
GGGCAGGTCG TGAACGTCGA CGGCGGTACG GTCCTGCGCT GA
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| Protein sequence | MDGLQGKIIL VAGAATGLGA DSAGRLAREG AKVVVGDLDL TGAERTAAAI REAGGDAVAA
GFDISDDASV AELVALTVRT HGGLDAVHVN AGDMGAVQKD SNVVDIDLAI WDRTVAVNLR
GHMLVSRHAI PRLLERGGGA IVYTSSIASF TGEPQRPAYA VTKAGINALA RHVASRWGTE
GIRANAVTPG LILTREIRDG APPDMLSAML ARTRSTRHGE ARDVSSMVAY LLSDEGSWIN
GQVVNVDGGT VLR
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