Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1608 |
Symbol | |
ID | 5670011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 1924480 |
End bp | 1925646 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641240527 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001505953 |
Protein GI | 158313445 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0385936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTTCG AACTCACTCC GGATCAGGAG CAGCTCAGGG CCGGGGCGCG GGAGCTCGCC CGCAGCTTCG CGGACGACTA CTGGGCGGAG AAGGACCAGA AGGGCGAGTT CCCGTGGGAC TTCTACAACG CGTTCGCCGA GGGCGGCTGG CTCGGCATCG CCATCCCGAC GGAGTTCGGC GGCGGCGGGC TGGGAATCGC CGAGGCGTCG CTGCTGCTCG AGGAGATCGC CGCCTCGGGT GCCGGCATGA ACGGGTGCAG CATCATGCAC CTGACCATTT TCGGCCTGAA CACGATCGTC AAGCACGGTA GCCCGGACCT GCAGAAGGAG ATCCTGCCGT CCGCGGCGGA CGGCTCGCTG CACGTGTGCT TCGGCGTGAC CGAGCCGAAC GCGGGGACGG ACACCACCCG GATCACCACC TTCGCCGAGA AGGTGGACGG CGGCTACCGG ATCAACGGCC GGAAGGTCTG GATCACCAAG GCCGGCGACT CGCAGAAGAT GATCCTCATC GCGCGGACGA CGAAGCGCGA GGAGAGCGCC CGGCCCACCG ACGGCATGTC GCTGTTCCTC ATCGACATCG ACCGGAAGCA CATCGACCTG CGCGCCATCC CGAAGATGGG GCGCAACGCG GTCTCGTCCT ACGAGGTTTT CATCGACAAC TACTTCGTGC CCGAGTCCGC GCGCATCGGC GAGGAGGGCA AGGGCTTCAA GTACCTGCTC GACGGCCTGA ACCCCGAGCG CATCCTGCTC GCCCACGAGG CGCTGGGCAT CGGGCGCGCC TCGCTGGAGA AGGCCACCCG CTACGCCAAG GAGCGGATCG TCTTCGACCG GCCGATCGGC CAGAACCAGG GCATCGCCTT CCCGCTGGCG GAGGCCCAGA TCCGGCTGGA CGCCGCCGAG CTGATGGCAC GCAAGGCCGC CTGGCGCTAC GACCAGGGGC TGCCCTGCGG GCCCGAGGCG AACATGGCGA AGTGGCTGTG CGCGGACGCC GGATTCAAGG CCGCCGACCA GGCCATCCAG ACCCACGGTG GCATGGGCTA CGCCCGCGAG TACCACGTCG AGCGTTACTT CCGCGAGTCG CGGATCATGC GCCTGGCGCC GGTCAGCCAG GAGATGGTCC TCAACTACGT CTCCCAGCAC GTGCTCGGCC TGCCGAAGTC GTACTGA
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Protein sequence | MHFELTPDQE QLRAGARELA RSFADDYWAE KDQKGEFPWD FYNAFAEGGW LGIAIPTEFG GGGLGIAEAS LLLEEIAASG AGMNGCSIMH LTIFGLNTIV KHGSPDLQKE ILPSAADGSL HVCFGVTEPN AGTDTTRITT FAEKVDGGYR INGRKVWITK AGDSQKMILI ARTTKREESA RPTDGMSLFL IDIDRKHIDL RAIPKMGRNA VSSYEVFIDN YFVPESARIG EEGKGFKYLL DGLNPERILL AHEALGIGRA SLEKATRYAK ERIVFDRPIG QNQGIAFPLA EAQIRLDAAE LMARKAAWRY DQGLPCGPEA NMAKWLCADA GFKAADQAIQ THGGMGYARE YHVERYFRES RIMRLAPVSQ EMVLNYVSQH VLGLPKSY
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