Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1598 |
Symbol | |
ID | 5670001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1910234 |
End bp | 1911016 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641240517 |
Product | hypothetical protein |
Protein accession | YP_001505943 |
Protein GI | 158313435 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.651223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCCCGG ACTCGCCGCG CCGGTTCACG GCATGCGTAG ATCGCCCACC GCCTGCGGCC TGTGGTTCGG AGTCGTCGCG GGCGCGGATC TTGACCGTTC GGTTGAGTGA ACGCATACTC GCCCGAATGT CGAACGGCGG GAACGGCGGA CCGGAACCGA AGGCACTCCC GATACCGGCG GACTGGGATG ACGTCACTCC CGCCTGGATG ACGGTGGCAC TCGCCAGCCG GCACCCGGGC ACGGAGGTCG GTGAGGTCAG GCTGGTCCTC CGGGACGACG GCAACAACCG CCGTGCCCGG TTCGGTGTCA CCTACAGTGC GGGCACCGGC CCGGCCACCG TGTTCTGCAA GGCGGAGGGC CTCGGCGAGC ACCGGGTGCT GCACCGGAAC AACGGAGACG CCCACATCGG CAACACCTAC GTCCTGCCCG ATGGCGAGGT CGGGTTCCTC GACTGGCAGG TGGCGCGGCG CGGCGGCTGG TCGCAGGACG TCGGCTACTT CCTGGTGGGC TCGCTGACGG TGACGGACCG GCGCGAGCAC GAGGCCGACC TGGTCGCGGA GTACCTGGGG GCGCTGGAAG TGCCGGGGGA GCGGCGCCCG TCGCCGGAGG CCGGCTGGCT GTCCTACCGT GCCTCGGCGG CCTACGGTCT CGCGGTGTGG CTGTCTACGC TGGGAACCGA CGGCTGGCAG CGCCGGGACG TCTCGCTCGC CCTCGCCGAG CGGTACGGGG CGGCGTTCGT CGAGCTGGAG ACCGAGGCGG CGCTGGATCG CCTGAACCCC TGA
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Protein sequence | MPPDSPRRFT ACVDRPPPAA CGSESSRARI LTVRLSERIL ARMSNGGNGG PEPKALPIPA DWDDVTPAWM TVALASRHPG TEVGEVRLVL RDDGNNRRAR FGVTYSAGTG PATVFCKAEG LGEHRVLHRN NGDAHIGNTY VLPDGEVGFL DWQVARRGGW SQDVGYFLVG SLTVTDRREH EADLVAEYLG ALEVPGERRP SPEAGWLSYR ASAAYGLAVW LSTLGTDGWQ RRDVSLALAE RYGAAFVELE TEAALDRLNP
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