Gene Franean1_1598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1598 
Symbol 
ID5670001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1910234 
End bp1911016 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content72% 
IMG OID641240517 
Producthypothetical protein 
Protein accessionYP_001505943 
Protein GI158313435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.651223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCCGG ACTCGCCGCG CCGGTTCACG GCATGCGTAG ATCGCCCACC GCCTGCGGCC 
TGTGGTTCGG AGTCGTCGCG GGCGCGGATC TTGACCGTTC GGTTGAGTGA ACGCATACTC
GCCCGAATGT CGAACGGCGG GAACGGCGGA CCGGAACCGA AGGCACTCCC GATACCGGCG
GACTGGGATG ACGTCACTCC CGCCTGGATG ACGGTGGCAC TCGCCAGCCG GCACCCGGGC
ACGGAGGTCG GTGAGGTCAG GCTGGTCCTC CGGGACGACG GCAACAACCG CCGTGCCCGG
TTCGGTGTCA CCTACAGTGC GGGCACCGGC CCGGCCACCG TGTTCTGCAA GGCGGAGGGC
CTCGGCGAGC ACCGGGTGCT GCACCGGAAC AACGGAGACG CCCACATCGG CAACACCTAC
GTCCTGCCCG ATGGCGAGGT CGGGTTCCTC GACTGGCAGG TGGCGCGGCG CGGCGGCTGG
TCGCAGGACG TCGGCTACTT CCTGGTGGGC TCGCTGACGG TGACGGACCG GCGCGAGCAC
GAGGCCGACC TGGTCGCGGA GTACCTGGGG GCGCTGGAAG TGCCGGGGGA GCGGCGCCCG
TCGCCGGAGG CCGGCTGGCT GTCCTACCGT GCCTCGGCGG CCTACGGTCT CGCGGTGTGG
CTGTCTACGC TGGGAACCGA CGGCTGGCAG CGCCGGGACG TCTCGCTCGC CCTCGCCGAG
CGGTACGGGG CGGCGTTCGT CGAGCTGGAG ACCGAGGCGG CGCTGGATCG CCTGAACCCC
TGA
 
Protein sequence
MPPDSPRRFT ACVDRPPPAA CGSESSRARI LTVRLSERIL ARMSNGGNGG PEPKALPIPA 
DWDDVTPAWM TVALASRHPG TEVGEVRLVL RDDGNNRRAR FGVTYSAGTG PATVFCKAEG
LGEHRVLHRN NGDAHIGNTY VLPDGEVGFL DWQVARRGGW SQDVGYFLVG SLTVTDRREH
EADLVAEYLG ALEVPGERRP SPEAGWLSYR ASAAYGLAVW LSTLGTDGWQ RRDVSLALAE
RYGAAFVELE TEAALDRLNP