| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1555 |
|---|
| Symbol | |
|---|
| ID | 5669958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 1862108 |
|---|
| End bp | 1863409 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641240474 |
|---|
| Product | VWA containing CoxE family protein |
|---|
| Protein accession | YP_001505900 |
|---|
| Protein GI | 158313392 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.61333 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCAGG AACCCGCACC GCGAGGTGTG GGAATCCCCG GTCTTCAGAC CGGGGAGGAG
GTCAATGAGC GCACTCCGGC GGGCGAGGGG TCCACCCACG CCGGCACCCG CGCCGGTGCC
GCCGTCGCCG ACGACACGGA GCGGTTGCGG CGCTGGCGCA TGGTGCTGGG CGCGCCGGCC
GCGCCCGTCC TGGACGGGCG GATCTCCCTG TCCGGCCCCG ACGGGGAGAT CGACGCGGCG
CTCGGTGCCC TCTACGACGC GGACGCGGCG GGGGAGGGGC GCCGGCGGCG CTCGGGCGGT
CTGGGCGCGT CGGCGCCGTC CGTGGCCCGC TGGCTGGGAG ATATCCGGAC CTACTTCCCG
ACCTCGGTCG TGCGCGTGCT GCAACGCGAC GCGGTCGCTC GCCTGGGGCT CGGTCAGCTC
CTGCTCGAGC CGGAGCTGCT CGCGGCCGCG GAACCGGACG TCCACCTCGT CGGGACACTG
CTGTCGCTGC GCTCCGCGCT GCCCGAACGC ACCAGGGAGA CCGCCCGCGC CGTGGTCCGG
CGCGTCGTCG AGGACATCGA GCGGCGGTTG GAACAGTCGC TGCGCAGCGC CGTCCTGGGC
GCCGTGGACC GGACGTCCCG CACCCGCACT CCCCGCCTGC CCGACGTCGA CTGGGATCGC
ACCATCCTCG CGAACCTGCG CAACTACCAG CCTGAGCAGC ACACCGTGAT CGTCGATCGG
CTCATCGGCC ACACCAGGGC GCGGCGCACC GCCGCCCTGC GGGACGTCAT CCTGCTCATC
GACCAGTCCG GGTCGATGGC GTCGTCCGTC GTCTACGCGG GGGTGCTCGG CGCGTCACTG
GCGACGCTGC GGGCCGTGTC CACCCGGCTG ATCGTCTTCG ACACGTCGGT GGTGGACCTG
ACCGACCAGC TCGACGACCC GGTCGACCTG CTGTTCGGCG TCCGGCTCGG CGGCGGGACC
GACATCGACC GTGCCGTCGG CTACGGCGCG TCGCTCGTCA CCCGGCCCAC CGACACGGTC
TTCGTCCTGA TCAGCGACCT GATCGAGGGC GGTGACCAGT CGTCGCTGGT GGCCCGGCTG
CGGGCGCTCG TCGAGGCCGG GGTGTGCGTC GTCGTCCTGC TCGCCCTGTC CGACGACGGC
ACCCCCGCCT ACGACCACCG GCTCGCCGCG ACCTGCGCCG AGCTCGGGGC GCCCGCGTTC
GCCTGCACCC CGGACAGGTT CCCCGAGCTG CTGGCCACCG CGCTGCGCCG CGACGACGTC
GGCCGCTGGG CCTCCGTCCA GGGGCTGGTG CGCCCGGCCT GA
|
|---|
| Protein sequence | MKQEPAPRGV GIPGLQTGEE VNERTPAGEG STHAGTRAGA AVADDTERLR RWRMVLGAPA
APVLDGRISL SGPDGEIDAA LGALYDADAA GEGRRRRSGG LGASAPSVAR WLGDIRTYFP
TSVVRVLQRD AVARLGLGQL LLEPELLAAA EPDVHLVGTL LSLRSALPER TRETARAVVR
RVVEDIERRL EQSLRSAVLG AVDRTSRTRT PRLPDVDWDR TILANLRNYQ PEQHTVIVDR
LIGHTRARRT AALRDVILLI DQSGSMASSV VYAGVLGASL ATLRAVSTRL IVFDTSVVDL
TDQLDDPVDL LFGVRLGGGT DIDRAVGYGA SLVTRPTDTV FVLISDLIEG GDQSSLVARL
RALVEAGVCV VVLLALSDDG TPAYDHRLAA TCAELGAPAF ACTPDRFPEL LATALRRDDV
GRWASVQGLV RPA
|
|---|
| |