Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1554 |
Symbol | |
ID | 5669957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1860955 |
End bp | 1862088 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641240473 |
Product | IS605 family transposase OrfB |
Protein accession | YP_001505899 |
Protein GI | 158313391 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.596284 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGAAGC GGGCGTACCG CTACCGCTTC AACCCGACCC CCGATCAGGC CGCCCAGCTC GCGCGAACCT TCGGCTGTGT CCGCTACGTG TACAACCGGG CGCTCGCCGA ACGGCACCGG GCCTGGTTCC AGGAGCAGCG GCGGGTCACC CACGCCGAGA CCGACCGGAT GCTCACGGCG TGGAAGCGCG ACCCGGAAAC GGAATGGCTC GCCGAGCCGT CGAAAGGCCC GCTTCAGGCC ACGCTGCGGA ATCTCCAGAC CTCGTATGTG AACTTCTGGC AGAAACGCGC CGGCTACCCG ACGTTCAAGA AGAAGGGCAG GACTCTCGAC TCGGCGACCT ACTTCCGGAA CTGTTTCAGT TTTCGGGACG GTCGGATCAC GCTGGCGAAG CAGGACGGGC CGCTGGCGAT CGTCTGGTCG CGTCCGCTGC CCGAGGGCGC GGAGCCCTCG CAGGTCACGG TGTCGCGGAA CGCCCGCGGC CAGTACCACA TCTCGATCCT GGTCGAAGAG ACGATCACTA CGCTTCCCGC GTTGCCCGGG CGGGTGGGGA TCGACGCGGG GGTCGCCTCG CTGGTCACCC TGTCGACGGG GGAGAAGGTG GCCAACCCGA AGCACGAGCG TCGGGACCGG GCCCGGCTGG CCCGTGCGCA GCGGGACCTG TCCCGGAAGG TGCAGGGGTC GGCGAACCGG GCGAAGGCCC GAGCGAGGGT CGCCCGGGTG CACGGTCGGA TCGCCGACCG GCGTCGGGAT CATCTCCACG CGCTGTCCAC GAGGATCATC CGCGAGAACC AAACGGTGGT CATCGAGGAT CTGTCCGTCC GCAACATGGT CAGGAACCAT TCGCTCGCGC GGGCGATATC CGATGCTTCG TGGTCGGAGT TGCGGCGGAT GTTGGAGTAC AAGGCCGGCT GGTACGGTCG CACCCTCATT GCGATCGATC GGTTCTATCC GTCGTCCAAA ACCTGTTCGG TGTGCGGGTC GATCGTGAAG GAACTGCCGC TCAACGTCCG GGAATGGGCC TGCCGTGGTT GCGGCACGGT CCACGACCGG GACGTGAACG CGGCGGTCAA CATTCTGGCC GCGGGGCTCG CGGTGGCTGC CTGTGGAGAT GGAGTGAGAC CGCCTCGCTC CTGA
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Protein sequence | MVKRAYRYRF NPTPDQAAQL ARTFGCVRYV YNRALAERHR AWFQEQRRVT HAETDRMLTA WKRDPETEWL AEPSKGPLQA TLRNLQTSYV NFWQKRAGYP TFKKKGRTLD SATYFRNCFS FRDGRITLAK QDGPLAIVWS RPLPEGAEPS QVTVSRNARG QYHISILVEE TITTLPALPG RVGIDAGVAS LVTLSTGEKV ANPKHERRDR ARLARAQRDL SRKVQGSANR AKARARVARV HGRIADRRRD HLHALSTRII RENQTVVIED LSVRNMVRNH SLARAISDAS WSELRRMLEY KAGWYGRTLI AIDRFYPSSK TCSVCGSIVK ELPLNVREWA CRGCGTVHDR DVNAAVNILA AGLAVAACGD GVRPPRS
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