| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1552 |
|---|
| Symbol | |
|---|
| ID | 5669955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 1857201 |
|---|
| End bp | 1858388 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641240471 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_001505897 |
|---|
| Protein GI | 158313389 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0714] MoxR-like ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00806987 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.569972 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAT CGACCCAGCC GCCCGCCGGG ATCGCGCCCG AGACCACCGC CGTCCCGACG
CGGCCGGTCG GTGCCGCCCC GCAGGGCTCC GGCGACCAGC TGCTGCGCCC GCACGCGGAG
CAGGCGTTCG CCGCCGAGCT GGCCGCTCTC GCCGCGACCG ACCGGCGCCG CCGTCCGCCG
TCCTGGCGGC TCTCGCCCTG GGCCGTCGTC ACCTACGTGC TCGGCGGCAC GCTGGAGGAC
GGCACGGTGA TCACACCCAA GTACATCGGC TCGCGGCGGC TCGTCGAGGT CGCCGTGGCC
ACCCTCGCGA CCGACCGGGC GCTGCTGCTC CTCGGCAGCC CGGGCACGGC GAAGTCGTGG
CTGTCCGAGC ACCTCGCCGC CGCGATCTCC GGCGACTCGA CCCTGGTCGT GCAGGGCACG
GCCGGCACGT CCGAGGACGC TGTCCGCTAC GGCTGGAACT ACGCGCGGCT CATCGCCGAG
GGGCCGTCCA AGGACGCGAT GGTGCCCTCG CCGGTGATGC GCGCGATGGC CGGGGGCTCG
CTCGCCAGGG TCGAGGAGCT CACCCGGATG GGCGCCGAGG TACAGGACGC GCTGATCACC
GTGCTGTCGG AGAAGACGCT GCCCGTCGCG GAGCTCGCCA GCGAGGTGCA GGCCGTCGCC
GGGTTCAACA TCATCGCCAC CGCCAACGAC CGGGACCGGG GCGTCAACGA GATGTCCTCG
GCGCTGCGCC GGCGGTTCAA CACCGTCGTG CTGCCGCTGC CGGCCACGGA GGACGTCGAG
GTCGAGATCG TCAGCCGCCG CGTCGCCCAG CTGGGCCGCG CGCTGGACCT GCCGGCCGAG
CCGCCGGCGG GCGCCGAGGT CCGCCGCGTC GTGCGGATCT TCCGCGAGCT GCGCTCCGGG
GTCACCAGCG ACGGCCGCAC CACGGTGCGG ACACCGTCGT CGACCCTGTC CACCGCCGAG
GCGATCAGCG TGATCACGGG CGGGCTGACC CTGGCCGCCC ACTTCGGCGA CGGCAGGCTG
TCGGCCGAGG ACGTCGCCGC CGGGCTCGTC GGGGCCGTGG TCAAGGATCC CTCCACCGAC
CCCGTGGTCT GGCGGGAGTA CCTCGAGGGC GTCGTGCGGG ACCGCGACGG TTGGAAGGAC
CTGTACCAGG CCTGCTGGGA TCTCGACACG GAGGCGCGCG GCAGATGA
|
|---|
| Protein sequence | MTTSTQPPAG IAPETTAVPT RPVGAAPQGS GDQLLRPHAE QAFAAELAAL AATDRRRRPP
SWRLSPWAVV TYVLGGTLED GTVITPKYIG SRRLVEVAVA TLATDRALLL LGSPGTAKSW
LSEHLAAAIS GDSTLVVQGT AGTSEDAVRY GWNYARLIAE GPSKDAMVPS PVMRAMAGGS
LARVEELTRM GAEVQDALIT VLSEKTLPVA ELASEVQAVA GFNIIATAND RDRGVNEMSS
ALRRRFNTVV LPLPATEDVE VEIVSRRVAQ LGRALDLPAE PPAGAEVRRV VRIFRELRSG
VTSDGRTTVR TPSSTLSTAE AISVITGGLT LAAHFGDGRL SAEDVAAGLV GAVVKDPSTD
PVVWREYLEG VVRDRDGWKD LYQACWDLDT EARGR
|
|---|
| |