| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1507 |
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| Symbol | |
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| ID | 5669911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1809518 |
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| End bp | 1810891 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641240427 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001505853 |
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| Protein GI | 158313345 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000169816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGTCCCACC CCCTTGCCGG ACCCGCCGAT CTTGCCAGTG ACGCCGATCC TGCCAGTGAC
GCCGACGCCG ACGCCGACGC CGACGCCGAC GCCGTCACGG CACCGCGGGC GGGTGCCGTC
GTGGCGGTTC TGGCGTTCGC CGGGATCGTG GTCGCGTCGA TGCAGAGCCT GGTGATCCCG
CTGCTCCCCG AGCTGCCCGG GCTGGTGCAC GCGTCGGCGT CCGGGACGGC TTGGGCGATC
ACCGCGACGC TGCTCGCCTC CGCCATCGCC ACTCCGGTGG CGGGCCGGCT CGGGGACATG
TACGGCAAGC GGCGCATGCT GCTGGCCAGC CTCGGCCTGT TGGTGGTCGG CTCGGCCGCC
GCCGGCCTGT CCACCACCCT GACCCCCCTG GTCATCGGGC GGACACTGCA GGGTCTGTCA
GCCGGTGTCA TCCCGCTGGG GATCAGCATC ATGCGCGACG AGCTGCCGCC CGAGCGCCTC
GGTTCGGCGA CCGCGACGAT GAGCTCCTCG CTCGGTGTTG GCGGCGCCCT GGGCCTGCCC
GCGGCGGCCC TGATCGCCGA CCACACCGAC TGGCACCTGC TGTTCTGGAT CTCGGCGGGG
CTGGGCGTCG TCGCCACGGC ACTCGTGCTG CGGCTGGTGC CGGAATCCCG AGCCCGCACC
GGCGGGCGCG TCGACCTGGT CGGTGCGGCA GGGTTGTCGG CCGTGCTCGT GTGCCTGCTG
CTGGCGATCT CCCAGGGGGC CGACTGGGGC TGGGCCAGCG GCCGCACCCT CGGCCTGTTC
GTCGCAGGCG TCGCGGTCCT GCTGGCGTGG GGGCGCTGGG AGCTGCGCGC GCGGCAGCCG
CTGGTGGACC TGCGCACCAG CGCGCGACGT CAGGTGCTGG TCACCAACCT CGCCTCGGTC
ATGTTCGGTG TCGCCACGAT GCCGGTCCGG CTGGTGCAGC CCCAGATACT GCAGCTGCCC
GCCGCCACCG GCTACGGGCT GGGGAAGTCG CTTCTGGTCA CCGGCCTGGT CCTGACCCCC
ACGGGCCTGG TGATGATGGC CGTCTCACCG CTGTCCGCGC GTATCTCCGC CGCCAGGGGA
CCGAAGACGA CCCTGATGGC CGGAGCCGTC GTGATCGCCG CCGGCTATGC GCTGGGCATC
GGGCTGATGT CCGCCATCTG GCAGCTCATG ATGGTCACCA GCGTCATCGG CGCCGGGATC
GGGCTCGCCT ACGGCGCCAT GCCGGCGCTC ATCATGGCGG CGGTTCCGAT CTCCGAGACC
GGCGCCGCCA ACAGCCTCAA CAGCCTCATG CGGACCATCG GCGCGGCTCT GCTCGCCCTG
GCCATCGCCA CGCTCGTACC CCGCCGTCGC CCGCTTGTGC ATGCCGACGC ATGA
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| Protein sequence | MSHPLAGPAD LASDADPASD ADADADADAD AVTAPRAGAV VAVLAFAGIV VASMQSLVIP
LLPELPGLVH ASASGTAWAI TATLLASAIA TPVAGRLGDM YGKRRMLLAS LGLLVVGSAA
AGLSTTLTPL VIGRTLQGLS AGVIPLGISI MRDELPPERL GSATATMSSS LGVGGALGLP
AAALIADHTD WHLLFWISAG LGVVATALVL RLVPESRART GGRVDLVGAA GLSAVLVCLL
LAISQGADWG WASGRTLGLF VAGVAVLLAW GRWELRARQP LVDLRTSARR QVLVTNLASV
MFGVATMPVR LVQPQILQLP AATGYGLGKS LLVTGLVLTP TGLVMMAVSP LSARISAARG
PKTTLMAGAV VIAAGYALGI GLMSAIWQLM MVTSVIGAGI GLAYGAMPAL IMAAVPISET
GAANSLNSLM RTIGAALLAL AIATLVPRRR PLVHADA
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