Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1391 |
Symbol | |
ID | 5669799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1684631 |
End bp | 1685146 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641240317 |
Product | hypothetical protein |
Protein accession | YP_001505744 |
Protein GI | 158313236 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1468] RecB family exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.268781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAATCGG CACCGGTCCA TCACGACCAC GGGCTCGGCG GGGTCCACAT CAAGTACCTG CTGCACTGCC CCCGTCAATT GTGGCTCTAC ATGCGTGGCT ACCGCCCCGA GGCCACGAGC GACCTCGTCG CTTTCGGCGA GATCGTCGAC GACACCACCT ACACCCGTCG CCGCGACGTC GACCTCGGCC AAGCGAAGAT CGACTGGGTG ACCACGGGAG CGGTCATCCA CGAGACCAAG TCGTCCCGGA CGCCGTCGCC GGCACACGAG GCTCAGGTCC GCCACTACTG CCTGCTGTTG GAACGCCGTG GCGTTCACGT CCGCGGCGGC ACCATCCACT ACCCACTGAT CCGGCGCACC GTCCCCGTCA CCTGGGACGA CGCCGCCCGC GGCCAAGCAC TCGACACCGA GAAACAGGCC GCCGCCGTGA TCTCCGCACC AGCCGCACCG CCACGGCTGG AACGCCGGCG CTGCCGCGGC TGCTCCTATC TCGACTACTG CTGGGGACAG ACATGA
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Protein sequence | MKSAPVHHDH GLGGVHIKYL LHCPRQLWLY MRGYRPEATS DLVAFGEIVD DTTYTRRRDV DLGQAKIDWV TTGAVIHETK SSRTPSPAHE AQVRHYCLLL ERRGVHVRGG TIHYPLIRRT VPVTWDDAAR GQALDTEKQA AAVISAPAAP PRLERRRCRG CSYLDYCWGQ T
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