Gene Franean1_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1366 
Symbol 
ID5669775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1646263 
End bp1646802 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content72% 
IMG OID641240293 
Producthypothetical protein 
Protein accessionYP_001505720 
Protein GI158313212 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGTC GTCGCCGCTC TGAGGCGGTC GCGTCGACGA GGTCACCGGC CCGGTCACGT 
TCGGTCTGGC TGAGCCGTCC AGTGGTGGCC GCTAACCGCT GGCCGGCTGC CGGCAGGCGG
GCTGCTTCGC CTCCGGTGGC CCCCGGGGCG GACGAAGGCT CGATCAGCCT CTTTCTCTGC
GTCGTGCTGT TCGGCGCCTC GTTGCTGTTC GCTGCCCTGC TGAGTGACCA GGCGCGCGTC
CTGCACGCCA ATGGACAGGC CTTCGACCTC GCCGGAAGCG CCGCGCGAGT CGGCGCGCAG
CAGCTTGACC CCACCGCGCT CGCGGCCGGG GCGGTCCAGG TCGACCCGCG CGCCGCGACG
TCAGCCGTGC ACGCCTATCT GGCCGCCCAC GACGTCACCG ACATCCGCGT GACGGCCACC
GAGGCGACGG TGACCGTCAC GTTGACCCAG CACGTCGCCT TCCGGATTCC CATACTTTCC
AGCGCTTCCG GGGCGGACAT CACCCAGACC CGGTCCGCGA CCGCCACGGC CGGACCCTGA
 
Protein sequence
MIRRRRSEAV ASTRSPARSR SVWLSRPVVA ANRWPAAGRR AASPPVAPGA DEGSISLFLC 
VVLFGASLLF AALLSDQARV LHANGQAFDL AGSAARVGAQ QLDPTALAAG AVQVDPRAAT
SAVHAYLAAH DVTDIRVTAT EATVTVTLTQ HVAFRIPILS SASGADITQT RSATATAGP