Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1270 |
Symbol | |
ID | 5669683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1527878 |
End bp | 1528849 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641240202 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001505630 |
Protein GI | 158313122 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1087] UDP-glucose 4-epimerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.473487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.360955 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGTCG TGGTGACCGG GGGCGCCGGG TTCATCGGTG CCCACCTGAC TCGTGCGCTG CTGGCCCGTG GCTGCGAGGT GGTCGTCGTC GACGACCTCA GCACCGGAGC CCGGTCGAAC CTGATCGGCC TGCCCGCGCG CCTCGTCCTC GGCAGCGTCA CCGACCGGGA GCTGCTGGAG GACGCCTGCA CCGGGGCGGA CAGCGTCGTC CATCTGGCGG CGCGGCCCTC CGTCGAGCGT TCGCTGCTCG ACCCGCTGGC CACCCACCAC GTCAACGCGA CCGGCACACT GACCGTGCTC GACGTGGCAC AGCGGGGCGA GACCCACGTG GTGGTCGTCT CCTCCGCTCT GGTATACGGG ACGTCCGGCG GCCGCTCCCA GAGCGAGGAC GACCCGCCGC GTCCGACCAG CCCGTACGCG GCCAGCGCGC TGGCGGCCGA GGGGTACGCC CTGGCGCACC AGGCGAGCTT CGGGCTGCCG GTCCTGGTCG CGCGGCTGTT CAACGTCTAC GGCCCGTACC AGCCGGCCCG GCACGCCCAC GCCGCTGTCG TGCCGTCGTT CATCGACGCC GCGCTGCGTG GACGTCCGCT GCCGGTGCAC GGCGACGGCC GGCAGACCAG GGACTTCACC TACGTCGAGG CGGTCGCCGG GCTGCTGGCC GACGCGGCCT GCCGTCGGCT GGCCCACCCC GGGCCGGTGA ACCTGGCGTT CGGGACGAGC ACCGACCTGC TGGCGTTGGT CGCCCACCTC GAGGACATCC TCGGCCGCCG GCTGGACGTG GCGCACGGCG CGCCGCGCGC CGGGGACGTC CGCGACTCGC GCGCCCGCCC GGACGCCATG CACGCGCTGT TCGGCTCCGT CGAGCGCTCT GACCTGCGGG CGACCCTGGA GGAGACCGTG TACTGGTACC AGGAACGCCT CGGCGAGGCC CCCGGCGCCG CGCCCAGATC CGCGGACACC ACCCACCACT GA
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Protein sequence | MRVVVTGGAG FIGAHLTRAL LARGCEVVVV DDLSTGARSN LIGLPARLVL GSVTDRELLE DACTGADSVV HLAARPSVER SLLDPLATHH VNATGTLTVL DVAQRGETHV VVVSSALVYG TSGGRSQSED DPPRPTSPYA ASALAAEGYA LAHQASFGLP VLVARLFNVY GPYQPARHAH AAVVPSFIDA ALRGRPLPVH GDGRQTRDFT YVEAVAGLLA DAACRRLAHP GPVNLAFGTS TDLLALVAHL EDILGRRLDV AHGAPRAGDV RDSRARPDAM HALFGSVERS DLRATLEETV YWYQERLGEA PGAAPRSADT THH
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