| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1235 |
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| Symbol | |
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| ID | 5669648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1478003 |
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| End bp | 1481038 |
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| Gene Length | 3036 bp |
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| Protein Length | 1011 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641240167 |
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| Product | vitamin B12-dependent ribonucleotide reductase |
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| Protein accession | YP_001505595 |
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| Protein GI | 158313087 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00432808 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGAGA CCCGCGGCAA GGGGAACAGA TCGGCCGCGA AGGTGGCCGG GCTGAAGATC
CGGCGGGTTC GCACCACGCC CGGAGTCCAC CCCTACGACG AGGTGGAGTG GGAGTCCCGC
GACGTCGTCA TGACGAACTG GCGGGACGGA TCGGTCAACT TCGAGCAACG TGGGGTGGAG
TTCCCGACCG CCTGGTCGGT CAACGCCTCC AACATCGTCG CCAGCAAGTA CTTCCGCGGC
GCGCTCGGCT CGCCCGATCG GGAGTCGTCG CTGCGCCAGC TCATCGACCG GGTCGTGCTC
CGCTACGGCG CGGCCGGCCG CGAGCACGGC TACTTCGCGT CGGAGAGCGA CGCCGAGATC
TTCGAGCACG AGCTGACCTG GATGCTGCTG CACCAGGTCT TCAGCTTCAA CTCCCCGGTC
TGGTTCAACG TCGGGACGGC CGCGCCGCAG CAGGTGTCGG CGTGCTTCAT CCTCGCGGTG
GACGACACCA TGGAGTCGAT CCTCAACTGG TACCGGGAGG AGGGCCTGAT CTTCAAGGGC
GGCTCCGGTG CCGGTCTCAA CCTCTCCCGA ATCCGCTCCT CGAAGGAGCT CCTCTCCTCC
GGCGGCACCG CGTCCGGCCC GGTCAGTTTC ATGCGCGGCG CCGACGCCTC GGCGGGCACC
ATCAAGTCGG GCGGGGCGAC CCGGCGCGCG GCGAAGATGG TCGTCCTCGA CGTCGACCAT
CCCGACGTCG TCGAGTTCGT CGAAACCAAG GCGCGTGAGG AGGACAAGAT CCGCGCGCTG
CGCGACGCCG GGTTCGACAT GGACCTCGGC GGGCGCGACA TCGCCTCGGT GCAATACCAG
AACGCCAACA ACTCGGTGCG GGTCAACGAC GAGTTCATGC GCGCCGTGGT CGACGGGACG
TCCTTCGACC TGCGGGCGCG TCTCGACAAC CGGGTGATCG AGTCGGTGGA CGCCCGCGGG
CTGTTCCGCA CGATCTCCCA GGCCGCCTGG GAGTGCGCCG ACCCGGGCAT CCAGTACGAC
GGCACGATCA ACGACTGGCA CACCTGCCCG GAGTCCGGCC GGATCTCCGC GTCGAACCCG
TGCTCGGAGT ACGTCCACCT GGACAACTCG AGCTGCAACC TGGCCTCGCT GAACCTGATG
AAGTTCCTGC GGCCGGACCG CACCTTCGAC ACCGAGACGT TCGTCGCGTC CGTCGAGCTG
ATCATCACGG CGATGGACAT CTCGATCTGC TTCGCGGACT TCCCGACCCC GGAGATCACC
AAGGTGACCC GGGCGTACCG GCAGCTCGGT ATCGGGTACG CCAACCTGGG CGCGCTGCTC
ATGGCCAGCG CCCGTGCGTA CGACTCCGAC GGGGGCCGGG CGCTCGCCGC CGCGATCACC
TCGCTGATGA CTGCCACCGC CTACCGCCGC TCGGCGGAGC TCGCCGGCAC CGTCGGGGCC
TACGACGGCT TCGCCCGCAA CGCCGACGCC CACCGGCGGG TCGTGCGCAA GCACTCGGCG
GCGAACGACG CCGTCCGCAC CGTCCACGCG GAGGAGGCCC GCCTGATCAC CGCGGCCTCG
AAGGAGTGGG AGCGCGCGCT GTCGGTGGGG GAGAAGCACG GCTGGCGCAA CGCCCAGGTC
AGCCTGCTGG CCCCGACCGG GACGATCGGC CTGGCGATGG ACTGCGACAC CACCGGGATC
GAGCCGGACC TGGCCCTGGT GAAGATGAAG AAGCTGGTCG GCGGGGCCAG CATGAAGATC
GTGAACCAGA CGGTGCCCGC GGCGCTGCGC GCGCTGGGAT ACGCCGAGGA GACGATCGAG
GCGATCGTCG AGTACATCGC CGAGCACGGC CACGTCGTCG ACGCCCCCGG CCTGCGCACC
GAGCACTACG AGGTGTTCGA CTGCGCCATC GGGGACCGCG CGATCAGCCC GATGGGCCAC
GTCCGGATGA TGGCCGCCGT CCAGCCGTTC CTCTCCGGCG CCATCTCCAA GACGGTGAAC
ATGCCGGCGA CGGCCACCGT CGCCGAGGTC GAGGAGATCT ACCTCGAGGG ATGGCGGCTC
GGCCTCAAGG CCCTCGCGAT CTACCGGGAC AACTGTAAGG TCGGCCAGCC ACTGACGGAT
GTGAAGGGCG CGAAGCGGGA CGCCGCCGCG GCGGCCGAGG TGGCCTCCGA CGTGGCCGCC
CGGGCCGCCG CCGGAGCGGC CGCGGCCGTT GCAGCGGCGC CGTCCGCCGT GACGGCGCAG
CCCGCGGTCG GCCCCGGCGC TCCCGGCCCG CACTGGCCGG CCGGGCCCGG TGAGCACCGG
CCCGTCCGCC GCAGGCTGCC GAAGACGCGT CCGTCGCAGA CCGTCTCGTT CAGCGTCGGC
GGTGCCGAGG GGTACATGAC CGCCGGCTCC TACCCGGACG ACGGCCTCGG CGAGGTCTTC
ATCAAGATGT CCAAGCAGGG CTCCACCCTC GCCGGTGTGA TGGACGCGTT CTCGATCGCG
GTGTCCATCG CGCTGCAGTA CGGCGTGCCG CTGGAGGCCT ACGTCAGCAA GTTCATCAAC
ATGCGGTTCG AGCCGGCCGG TATGACCGAC GACCCGGACG TGCGGATCGC CCAGTCGATC
ATGGACTACC TGTTCCGCCG GCTGGCCCTG GACTACCTGA CCGAGGAGCA GCGCGCGGAG
CTGGGCATCC TGTCCGCCTC GGAGCGGACG CGGCGGTTGT CCGACCAGGC CGGCGGCGGC
CCGGCCGCGG CGGCGGAGCC GGAGATCGAC ATCGAGTCGC TGCGGGCGTC CGCCCCGGCC
GAGGGTGACT CGGACCCGGC GGCCACCGCC GGTGCGGCGC CGGCCCGGTC TGCGCCGGCC
CGGTCTGCGC CGGGCGGGTC CGCGCCGGCC GGGCCGGGCG TGGGCGGCGG GCCGGAGCTG
GTCGCGCAGG AGCTGCGACT GGCCATGCCG GGCGGTTCGC TGACCGCCCA GACGGTGGTC
GACGCGCCGC TCTGCTTCAC CTGCGGTGTG AACATGCGCC CGGCCGGCAG CTGCTACGTC
TGCGAGCAGT GCGGCTCCAC CAGCGGCTGC AGCTGA
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| Protein sequence | MTETRGKGNR SAAKVAGLKI RRVRTTPGVH PYDEVEWESR DVVMTNWRDG SVNFEQRGVE
FPTAWSVNAS NIVASKYFRG ALGSPDRESS LRQLIDRVVL RYGAAGREHG YFASESDAEI
FEHELTWMLL HQVFSFNSPV WFNVGTAAPQ QVSACFILAV DDTMESILNW YREEGLIFKG
GSGAGLNLSR IRSSKELLSS GGTASGPVSF MRGADASAGT IKSGGATRRA AKMVVLDVDH
PDVVEFVETK AREEDKIRAL RDAGFDMDLG GRDIASVQYQ NANNSVRVND EFMRAVVDGT
SFDLRARLDN RVIESVDARG LFRTISQAAW ECADPGIQYD GTINDWHTCP ESGRISASNP
CSEYVHLDNS SCNLASLNLM KFLRPDRTFD TETFVASVEL IITAMDISIC FADFPTPEIT
KVTRAYRQLG IGYANLGALL MASARAYDSD GGRALAAAIT SLMTATAYRR SAELAGTVGA
YDGFARNADA HRRVVRKHSA ANDAVRTVHA EEARLITAAS KEWERALSVG EKHGWRNAQV
SLLAPTGTIG LAMDCDTTGI EPDLALVKMK KLVGGASMKI VNQTVPAALR ALGYAEETIE
AIVEYIAEHG HVVDAPGLRT EHYEVFDCAI GDRAISPMGH VRMMAAVQPF LSGAISKTVN
MPATATVAEV EEIYLEGWRL GLKALAIYRD NCKVGQPLTD VKGAKRDAAA AAEVASDVAA
RAAAGAAAAV AAAPSAVTAQ PAVGPGAPGP HWPAGPGEHR PVRRRLPKTR PSQTVSFSVG
GAEGYMTAGS YPDDGLGEVF IKMSKQGSTL AGVMDAFSIA VSIALQYGVP LEAYVSKFIN
MRFEPAGMTD DPDVRIAQSI MDYLFRRLAL DYLTEEQRAE LGILSASERT RRLSDQAGGG
PAAAAEPEID IESLRASAPA EGDSDPAATA GAAPARSAPA RSAPGGSAPA GPGVGGGPEL
VAQELRLAMP GGSLTAQTVV DAPLCFTCGV NMRPAGSCYV CEQCGSTSGC S
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