| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1223 |
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| Symbol | |
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| ID | 5669636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1463948 |
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| End bp | 1464655 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641240155 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001505583 |
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| Protein GI | 158313075 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.217708 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGGC GCCCGGAGCA ACGTTCCGAA CACCGAGCTG ACTACGGGTG GTCTCACATC
GACGCCGTCC TCGACAACCT CGACATTTTC CGCGAGGGAT TCGTCCAGAC GCTTCGGCTG
AGCCTGTTCG CGGCCGTGTC CGCGCTGATC CTCGGCACCG GCCTCGCGGC CATGCGGGTC
AGCCCGGTTC CGCCGCTGCG CTGGGCGGGG ACGGCCTACG TGGAGACCGT TCGTAACACG
CCACTCACCA TCGTGTTCTT CTTCGTGGTC TTCGTACTCC CGCAGGTCGA CATCGTCTTC
AGCTACTTCA CGTTCGCCGT CATGGCGTTG ACGATCTACC ACACCGCGCT CGTCTGCGAG
GCCGTGCGAT CCGGGGTGAA CGGCGTCGAC GCGGGCCAGG CGGAGGCCGC GCGGGCGCTG
GGCCTGACCT TCTCGCAGAC GCTGCGGCTC GTCGTGTTGC CCCAGGCGTT CCGCAACGTG
GTCCAGCCGC TGGGCAGCGT CGGCAGCGCG CTGATCCGCA ACACCTCCAT CGCCGCCGCG
TTCGGCGTCC AGGAGCTGAC CGGGATCAGT CAGCGGCTGA CCACCGCGAA CCCCGGCGAC
GTCATCGCCG TCCTGCTCGC CGGCATCGTC TGCTACCTGG TGCTGACGCT GTCCCTGGCC
TGGGCGGTCG GCCTCACCGA ACGACGGCTG ACGAGGACCC CGCGATGA
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| Protein sequence | MAGRPEQRSE HRADYGWSHI DAVLDNLDIF REGFVQTLRL SLFAAVSALI LGTGLAAMRV
SPVPPLRWAG TAYVETVRNT PLTIVFFFVV FVLPQVDIVF SYFTFAVMAL TIYHTALVCE
AVRSGVNGVD AGQAEAARAL GLTFSQTLRL VVLPQAFRNV VQPLGSVGSA LIRNTSIAAA
FGVQELTGIS QRLTTANPGD VIAVLLAGIV CYLVLTLSLA WAVGLTERRL TRTPR
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