Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1159 |
Symbol | |
ID | 5669572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1380808 |
End bp | 1381842 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641240091 |
Product | integrase family protein |
Protein accession | YP_001505519 |
Protein GI | 158313011 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.226555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGACGG GTGGCGATCC CGCGGCCACG GCCCGCGGTG GCCGTGGTGA CAGCGCTGGT GGCGGCAACG GCGGCCGCGC TGGCGCAGGT CCTGGTGACG GTGATAGAGG CAGTGGCGGC GACGGCTGGG CGGGTGCCGT CGAGGCTTTC GTGCGCCATC TGGTCGCCGA ACGGGATCGT TCGCCGGAAA CCGTCCGGGC CTATCGCGCC GATCTCGCGG GCCTACGTGC GCACGCCGCC GCGGCCGGCC GTACGGATCT CCTGGACCTG GATCTCGCCG TGCTCCGCGG GTGGCTGGCC GGCATGCGTT CCGCCGGAGC GGCACCAGCC ACCATCGCCC GCCGTGCGTC CCTCGCCAGG GTGTTCTCCG CCTTCGCCGC GCGGCGGGGA TTCCTCCCCG ATGACGTCGG GGCGCGGCTG GCGACCACCC GGGCGCCGCG GCGGATCCCC CAGGTACTCA CCGCGGCACA GGCGGACCGG CTGCTGGAGA CACGGCCTCG GGGCGATCGT GCGCAGGACC CGCGCGACGT CGCGCTGAAC CTGCGCGACG ATCTGGTCCT GGAGATCCTC TACGGCAGCG CGGTGCGGGT CTCCGAGCTG TGCCGGCTCG ACATCGGTGA CGTCGACCAC GAGCGGCGCC TCCTGCGCGT GCACGGCAAG GGCGGCCGCC AGCGCAGTGT GCCGTTCAGC GTGCCCGCGG CGGGCGCGCT CGACGTCTGG CTCACCAGGG GCCGGCCCTA CCTCGCGACG CGCGTCGAGG CGGCGCTGCT GCTCGGTGCC CGTGGCGGCC GGCTCGACCC GCGTTCCGTG CGCCGGCTCG TCCAGGCGCG CGGCGCCGCC GCGGGGGTTC CCACCGGTCT GACGCCGCAC GGCCTGCGCC ACGGCGCGGC CACCCACATG GTCGAAGGCG GCGCGGACCT GCGCTCCGTG CAGGAACTGC TGGGCCACGC CAGCCTGTCG ACCACGCAGA TCTACACCCA CGTCACCCCG GAGCGGCTGC GCGCCGCCTT CGACCAGGCC CATCCGCGGG CCTGA
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Protein sequence | MGTGGDPAAT ARGGRGDSAG GGNGGRAGAG PGDGDRGSGG DGWAGAVEAF VRHLVAERDR SPETVRAYRA DLAGLRAHAA AAGRTDLLDL DLAVLRGWLA GMRSAGAAPA TIARRASLAR VFSAFAARRG FLPDDVGARL ATTRAPRRIP QVLTAAQADR LLETRPRGDR AQDPRDVALN LRDDLVLEIL YGSAVRVSEL CRLDIGDVDH ERRLLRVHGK GGRQRSVPFS VPAAGALDVW LTRGRPYLAT RVEAALLLGA RGGRLDPRSV RRLVQARGAA AGVPTGLTPH GLRHGAATHM VEGGADLRSV QELLGHASLS TTQIYTHVTP ERLRAAFDQA HPRA
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