Gene Franean1_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1143 
Symbol 
ID5669556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1362453 
End bp1362764 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content70% 
IMG OID641240075 
Productacylphosphatase 
Protein accessionYP_001505503 
Protein GI158312995 
COG category[C] Energy production and conversion 
COG ID[COG1254] Acylphosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.563511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00936648 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACGAGG TTCGCGCGAC GAAGGACGCC TCCGGCGGGG ACATGGTCCG CCTCACCGCC 
CGGGTCGAAG GTCTTGTCCA GGGAGTCGGG TTCCGTGACT ACGTGCGCAC CAAGGGCCGT
CGTCTCGGGC TGGTCGGCTC TGCCACCAAT CTGCCCGACG GTGCCGTAGC GGTGATCGCG
GAGGGTGAGC GGGGCGCCTG CGAGGCGCTG CTCGAGCTGC TGGTGACCGG TCACACCCCG
GGGCACACCG AGCGGGTCGA TCATGTCTGG GGCGAGCCGC GAGGCGGATT GGCTGGCTTC
CTGCGGCGCT GA
 
Protein sequence
MNEVRATKDA SGGDMVRLTA RVEGLVQGVG FRDYVRTKGR RLGLVGSATN LPDGAVAVIA 
EGERGACEAL LELLVTGHTP GHTERVDHVW GEPRGGLAGF LRR