Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1143 |
Symbol | |
ID | 5669556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1362453 |
End bp | 1362764 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641240075 |
Product | acylphosphatase |
Protein accession | YP_001505503 |
Protein GI | 158312995 |
COG category | [C] Energy production and conversion |
COG ID | [COG1254] Acylphosphatases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.563511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00936648 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACGAGG TTCGCGCGAC GAAGGACGCC TCCGGCGGGG ACATGGTCCG CCTCACCGCC CGGGTCGAAG GTCTTGTCCA GGGAGTCGGG TTCCGTGACT ACGTGCGCAC CAAGGGCCGT CGTCTCGGGC TGGTCGGCTC TGCCACCAAT CTGCCCGACG GTGCCGTAGC GGTGATCGCG GAGGGTGAGC GGGGCGCCTG CGAGGCGCTG CTCGAGCTGC TGGTGACCGG TCACACCCCG GGGCACACCG AGCGGGTCGA TCATGTCTGG GGCGAGCCGC GAGGCGGATT GGCTGGCTTC CTGCGGCGCT GA
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Protein sequence | MNEVRATKDA SGGDMVRLTA RVEGLVQGVG FRDYVRTKGR RLGLVGSATN LPDGAVAVIA EGERGACEAL LELLVTGHTP GHTERVDHVW GEPRGGLAGF LRR
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