Gene Franean1_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1142 
Symbol 
ID5669555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1362042 
End bp1362317 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content73% 
IMG OID641240074 
Producthypothetical protein 
Protein accessionYP_001505502 
Protein GI158312994 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.543288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00930647 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCACACGC CGAGGCGATC TGCGATTCGG CGATCTCTCG CGTGTGCCGC CGCCGCGGGC 
TCGATAGGTG CCGCACTCCT CCTCTCCGGT TGTGGTCAGG ACTTTCATCA GGACGGTGGG
GTCACCCCGG TTCCGCACGC CAGCACCGAG GGCGTCCGCA CCGTGACGCC GGCCCCGGCC
CCCTCCGAGG AGGTGATCGG GCCGGGCTAC GCGCCGCCGC GCGGCGAGCG GCCGACTCAG
ACCGCGGTGC CCAACCTGCC CGGCGGCAAG CTGTAG
 
Protein sequence
MHTPRRSAIR RSLACAAAAG SIGAALLLSG CGQDFHQDGG VTPVPHASTE GVRTVTPAPA 
PSEEVIGPGY APPRGERPTQ TAVPNLPGGK L