Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1099 |
Symbol | |
ID | 5669513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1313143 |
End bp | 1314066 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641240031 |
Product | branched-chain amino acid aminotransferase |
Protein accession | YP_001505461 |
Protein GI | 158312953 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATCA CGCCCACCTC GAAGATCTGG ATGAGCGGCG AGTTCGTCGA CTGGGACGAC GCCCGCATCC ACGTGCTCAA CCCGACCCTG CACTACGGCT GGGGCGTGTT CGAGGGCATC CGTGCCTACT CGACGCCCGT CGGCAGCGCG GTCTTCCGGC TGACCGACCA CATCGCCCGC CTGTACCGCA GCGCGAAGAT CTACCTGATG GAGCCGACCT TCACGCCGGA GGAGCTTGTC CAGGCGACGA AGGACACCAT CGCGGTGAAC AACGTCGAGG AGTGCTACAT CCGGCCCCTG ATCTACCTCG GGTACGGCGA GATGGGCCTC AATCCGCTCC CGTCCTCGAT CGAGGTCATG ATCGCGGTCT GGCCCTGGGG CTCCTACCTG GGCGAGGACG CCGAGCGCAA CGGGGCTCGG GCGACGATCT CGACCTGGCG CCGCAACGAC CCGAACATCA TCCCGCCGGC CGCAAAGGCG TCCGGCCAGT ACCTCAACTC GTCGCTCGCC AAGGTCGCCG CGATCAAGGC CGGTTACGAC GAGGCGATCA TGACCAGCCC GAACGGCCAC ATCGCTGACG GCTCCGGCGA GAACGTCTTC ATTGTCTCCG GCCGGCAGGT GATCACCCCG CCGCTCAGCG ACGGGCCGCT CGGCGGCATC ACCCGCGCCT CCGTCATGCA GATCGCCGCG GACCAGGGCT ACGAGGTGCG CGAGCAGCAC ATCGTGCGCA CCGACCTCTA CCTCGCCGAC GAGGCGTTCT TCACCGGCAC CGCGGCCGAG ATCGTTCCCA TCTCCGAGGT GGACGACCGG CGGATCGGCG CGGGCCGGCC CGGCCCGGTC ACCCGGGAGA TCCTCGACAT CTTCCACCAG GCCACCCACG GCGAGGTCGA CCGCTACAAG GACTGGAACG AGCTCGTCAG CTGA
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Protein sequence | MAITPTSKIW MSGEFVDWDD ARIHVLNPTL HYGWGVFEGI RAYSTPVGSA VFRLTDHIAR LYRSAKIYLM EPTFTPEELV QATKDTIAVN NVEECYIRPL IYLGYGEMGL NPLPSSIEVM IAVWPWGSYL GEDAERNGAR ATISTWRRND PNIIPPAAKA SGQYLNSSLA KVAAIKAGYD EAIMTSPNGH IADGSGENVF IVSGRQVITP PLSDGPLGGI TRASVMQIAA DQGYEVREQH IVRTDLYLAD EAFFTGTAAE IVPISEVDDR RIGAGRPGPV TREILDIFHQ ATHGEVDRYK DWNELVS
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